Oncorhynchus tshawytscha (Chinook salmon): 112237654
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Entry
112237654 CDS
T05605
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
otw04054
]
112237654
Pattern recognition receptors [BR:
otw04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
112237654
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
TIR_2
LRR_9
LRR_6
LRRNT
Motif
Other DBs
NCBI-GeneID:
112237654
NCBI-ProteinID:
XP_024262008
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All DBs
Position
LG16:complement(19801172..19806784)
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AA seq
963 aa
AA seq
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MEVKITLSGKGNGSTYPRLSFFLCILLYFWVLFNPVNGYSMKHCRIRESLNVSVLCDGRN
LNAVPADIPLLVTSVNIAKNNISQIKSEDFKDLKFLKMLIMYSNRISHVENGSFSDLVAL
EQLNLAFNKLTSLSDQMFKGLDNLTVLQLENNHISSIASSSFQLLFSLKVLNLTSNKLHC
FKELKHILQLPSLLKLFIGNNSLNSLQSQEISNRSIGLTELDLSRNPLEIFSVTADIFPY
LKKLDLSFCGINGSMEWDVADRYFLSNVSSLDLSGIHMSLQGIGSVLQSINFSLASLGLD
KIGKDNLINVACHIPTLKTLRLQCNNFSSVSDKLLQSCTQVTDLDISGNNITDLSEAAFR
SIKDLKTLRLGYDGLSSVPNATRNLRTLKNLDLSHNIIKTLGCSDFSNLKRLEKLYLNNN
LISNLEGCVFLDLRALNSLTLRRNRILNLGEAFTKGLQHLKSLDLGFNKLTNIRTNYFKS
LRSLEDLALYDNEIKTLEDGAFVGLAKLKNLVLLNNVIGKSEIRGAVFKGLRSLKTLNMA
SNAIKYEKDEQLQQPPFTDLSSLENLYIFSQHYTKYMRQSCLPSNFLEGLNMLSEFQAGN
LHIAYLHPDTFIHTPQLLSLDISQNFFHALSPELFHPIPKLKRLTISKTELESLDFLIEA
NLTQVRFLKVRQNKIKWTNETVLHSLPALTLLDMQRNPFICDCRNAWFVQWAESNSQTQV
AYAHDYPCSYPDDLKDTKLLDLDTHSCSVDLGIFYFISTTSLVLLTLLGSFIYHLLRWQV
VYAYYLFLAYLHDSKRRNRQTPHQYDAFVSYNTHDECWVVRELLPELEGEQGWKLCLHHR
DFQPGKPIIENITDAIYRSRKTICVITHRYLQSEWCSREIQVASFRLFDEQKDVMILVFL
EEIPDHQLSPYHRMRRLVKRRTYLSWPRAGEDTRVFWQKLQVALETRDWPAEENPILTGV
ERQ
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgaaaataaccttgtcaggaaaaggaaatgggtctacatatcctcggttgagt
ttctttctatgcattcttctgtatttctgggttctatttaatccagtaaatggctactca
atgaaacactgcagaatcagggaatctctaaacgtgtctgtgctatgtgatggcagaaac
ctcaatgccgtaccagcagacatcccattattggtgacttctgtaaacatagcaaagaat
aacatttcacagataaaaagtgaggacttcaaagatctaaagttcctcaaaatgttaatc
atgtacagcaacaggatctctcatgttgagaatgggtctttttcagacctggtggctcta
gagcagctgaatctggcctttaacaaactcacatccctctcagaccaaatgtttaagggc
ctggacaacctcacagtactacaattggagaacaaccatatctcaagtatcgcctcctca
tcttttcagttactcttcagcttgaaggtactgaacttaaccagcaacaaactacattgt
ttcaaggagctgaagcacattttacaattgccaagcttgctgaagttgttcattgggaac
aacagcttgaactctttgcagtcacaggaaatatcaaataggtcaatagggctgacagag
ctggatctatccaggaatcctctggagatcttcagtgtcacagcagatatttttccctat
cttaagaaactagacctctccttctgtggcattaatgggagcatggaatgggatgtagcg
gacaggtattttctgagtaatgtgagcagcctcgacttgagtggcattcacatgtcttta
caggggattggttcggtgctccagagcatcaacttttcgttggcatctctggggctggat
aaaataggaaaagataacctcattaatgtagcctgccacatacctacactgaagaccctc
cgattgcaatgtaacaacttcagtagtgtctctgacaagctgctgcagtcctgcacacag
gtgactgacctggacatatcaggtaataatattactgacctgtcagaagctgcttttcga
tcaataaaagatcttaaaactctgagactaggctatgatggcctctcttctgtgccgaat
gctacaaggaatctccgcacattaaaaaatttggatctcagccacaacatcatcaaaacc
ttaggctgctcggatttctccaatctaaaaagacttgaaaaactctatcttaacaacaat
ttaatctcaaaccttgaagggtgtgttttcctggatttaagggccttaaatagcctgaca
cttagaaggaacagaatcctaaacttgggtgaggctttcacaaagggtttgcaacatcta
aagagcttggatttaggattcaataaactaaccaacatcagaacaaattacttcaaaagc
ttaagatcacttgaggatctggctttatatgacaatgaaataaagacactagaagatggg
gcctttgtgggtttggccaaacttaaaaatcttgtcctgctaaacaatgttataggtaaa
agtgaaatccgaggtgctgtgttcaaaggacttagaagcttaaaaactctcaatatggct
tccaatgctatcaaatatgaaaaagatgaacaactacaacaaccacccttcactgacctg
tcatctctggaaaacctctacatatttagtcagcattatactaagtatatgagacagtct
tgtctaccttccaactttcttgaaggtctgaacatgttatcagagttccaagcagggaat
cttcatattgcgtacctgcaccctgacacattcattcacacaccccagttgttgtccctt
gatatcagccagaatttcttccatgccctctccccagagctctttcacccaatccccaag
cttaaaagactcaccatctccaaaactgaacttgagtcattagatttccttatagaagcc
aatctcactcaagtccgtttcttaaaggtgagacagaataaaattaaatggaccaatgag
acagtgctgcactctctcccagccttaactctcctggacatgcaaaggaatcctttcatt
tgtgactgcagaaatgcttggtttgttcaatgggctgagagcaacagccaaacacaagtt
gcttatgcccatgactatccatgtagctatccagacgatctcaaggacactaaactgttg
gacctggacacccactcctgttcagtggacctaggcatcttctacttcatctcaaccact
tctctggtcctcctcaccctgctggggtcctttatctatcatctcctgaggtggcaggtg
gtatatgcctactacctcttcctggcttatctccatgactccaagcggaggaacagacaa
actcctcatcagtacgatgccttcgtttcctacaacacccatgatgaatgctgggtcgtg
agggagctgctgccagagttggagggagagcagggctggaagttgtgtcttcaccaccgg
gacttccagccaggtaaacccatcatagagaacatcacagacgccatctacaggagcagg
aaaaccatctgtgtgatcacccatcgatatctgcagagcgagtggtgctccagagagatc
caggtggccagcttccgtctttttgatgagcagaaggatgtgatgatcctggtgtttctc
gaagagatcccagaccaccagctctcaccctaccaccgcatgaggaggctggtgaagaga
cgcacctacctgagctggccaagagctggggaggacacaagggtcttctggcagaaactc
caggtggctttggagaccagggactggcctgctgaggagaaccccatcctcaccggggtg
gagaggcagtga
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