Oncorhynchus tshawytscha (Chinook salmon): 112237711
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Entry
112237711 CDS
T05605
Name
(RefSeq) perforin-1
KO
K07818
perforin 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112237711
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Motif
Pfam:
MACPF
C2
Motif
Other DBs
NCBI-GeneID:
112237711
NCBI-ProteinID:
XP_024262080
UniProt:
A0A8C8J4K9
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Position
LG22:38213994..38218559
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AA seq
524 aa
AA seq
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MTASVVLSPVFHPVFMGFLALSSLDGGFTCRLGTPEECANCSFVPGYKLAGMGYDVVTLR
QKRASVFDVNSYLANSCMVCVNPLTGGELQKLPLHMKDWRAESDCKRKTLSSYYYSVSSL
VDDIAFFIENDWKAGLKLENVDLQLAGSKSKVYGFASAHSNADKSSFSFQQFTCSVYSFS
VPSKPPLSLDFQRRIASLPHHYTSNSEAYKDIIDTYGTHYISDGDLGGMMKRVTSIRTCL
AALNKVFVSDVETCLSMGLDLDIPVGLPVDLGLNLLGGQCSKVATNSDSATGYSMGFLSH
HTEVNGGRTLNGVASMRKANIDSFVKWIKSLNEFPEMVSFSLQPLYQLVDDKQTSADLQT
AISQYVIDSGIKRIKTENQACRHSPDLSADCCPLLAGRGKLTVFVDRGFSIRGDGMAEPE
VYVKLWCSGQHRQTRWITTYDPLWHTHFNFNYVNTQSSLELQVWDKDPGERDDDLQGGCS
VNLEQGSHVHSCGLSNGSFTFSYTLTCDKHLTGDKCDQYYPSPN
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatcggtcgtcctctctcccgtgttccacccggtgttcatgggtttcctggct
ctgtcgagcttggatggagggttcacctgtcgtctagggaccccagaagaatgcgccaat
tgttcctttgtgcctggctacaaactggctgggatgggctatgatgttgtaacactgaga
caaaaacgggcctctgtgtttgatgtcaacagttacttggctaactcctgcatggtatgt
gtgaacccactgacaggaggtgagcttcagaaactccccttgcatatgaaggactggcgc
gccgaaagtgactgcaagaggaagactctgagttcctactactactctgtcagctctctt
gtggatgatatagccttctttatagagaatgactggaaggccgggctaaagctggagaat
gtagacctgcagttagcaggcagcaagtccaaggtgtacggctttgcatccgcacactca
aacgcagacaagtcttccttctcatttcaacaatttacctgctctgtctacagtttcagt
gtacccagtaaacccccacttagcctggatttccagcgacgcatagcttctctgccacac
cactacacatccaacagtgaggcgtacaaggacatcattgatacctacggaactcactac
atcagtgatggagacctcggagggatgatgaagagggtgactagcattcgcacctgtcta
gcagccctaaacaaggtctttgtgtccgacgtggaaacatgtctgagtatggggttggac
ttggacatacctgtaggactgcccgtagacttagggctaaaccttttgggtggacaatgt
tcgaaggtcgctaccaactctgacagtgcaacagggtacagcatgggcttcttaagtcac
cacacggaagtgaacggagggagaaccttaaatggagttgcttctatgagaaaagctaat
atagatagtttcgtaaaatggataaaaagcctaaatgagtttccggaaatggtatccttc
tccctgcagcctctatatcaactggttgatgacaaacagacgagcgctgatctacaaaca
gctattagtcagtatgtgatcgacagcgggattaagagaataaagacagagaatcaagca
tgcaggcattcacctgacctctctgctgattgctgccccctgttggcagggagaggcaaa
ctaacagtctttgtggaccgtgggtttagtataaggggtgatgggatggccgaaccagag
gtttacgtcaaactgtggtgttcaggtcagcacaggcagacccgctggatcactacctat
gatccactttggcatacacatttcaactttaactatgtaaacacccagtcctctctagag
ctccaggtgtgggataaggacccaggggaacgtgacgatgacctccagggtgggtgttct
gtaaacctggagcaggggagccacgtgcatagctgtggactcagtaatgggagtttcaca
ttctcttacacattaacttgtgacaaacacctgactggtgataaatgtgaccaatattac
ccctccccaaactag
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