Oncorhynchus tshawytscha (Chinook salmon): 112237723
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Entry
112237723 CDS
T05605
Name
(RefSeq) bile salt export pump-like
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112237723
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112237723
04147 Exosome [BR:
otw04147
]
112237723
Transporters [BR:
otw02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
112237723
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112237723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
AAA_30
ABC_ATPase
AAA_29
AAA_15
AAA_16
AAA_21
Rad17
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
112237723
NCBI-ProteinID:
XP_042179892
UniProt:
A0A8C8JT01
LinkDB
All DBs
Position
LG07:4968822..4985989
Genome browser
AA seq
1335 aa
AA seq
DB search
MPAGSVKLHSIKKLGEENNGFDEDPNDAYMMMGNTKQDTKSPNKKKEAAIRIGFFQLFRF
ATCRETLMMVGGSVCAFLHGSAQPLMLLVFGMLTDTFIEYDIELQELLDPRKECINNTIQ
WKNQSVWTDWLDSNNTDKMKNLTCGLLDIEYEMTNFAYYYVAIGCAVFLLGYLQISLWVT
SAARQIQIIRKMYFRKVMRMEIGWFDCNSTGELNTRMSDDINKINDAIADQVSIFIQRFT
TFVCGFAMGFVKGWKLTLVIIAASPLIGVGAALMALFVAKLTGQELQAYAKAGAVADEVL
TSIRTVAAFGGELKEVERYDKNLISAQRWGIRKGLIMGFFTGYMWFIIFLCYALAFWYGS
SLVVDTQEYSPGTLLQVFFGVLIAALNLGQASPCLEAFAAGRGAATIIFETIDREPDIDC
LSEAGYKLDKVKGDIEFHNVTFHYPSRPEVVILDKLSVAVNSGETTAFVGPSGAGKSTAV
QLIQRFYDPKEGMVTLDGHDIRGLNIQWLRSLMGIVEQEPVLFATTIAENIRYGRPGVTL
DDIIHATKEANAYNFIMDLPQKFDTLVGEGGGQMSGGQKQRIAIARALVRNPRILLLDMA
TSALDNESEAVVQEALDKVRNGRTTISIAHRLSTIKNADVIVGYEHGRAVERGKHDELLE
RKGVYFTLVTLQSQGDKALNQKARQMAGHDEPEQKSLSRAGSYRASLRSSIRKRTRSQLS
NLIPEAESFISQADAGKSAFVEEEEVEEQVEPAPVTRILKYNAPEWPYMLFGTIGAAVNG
GVNPVYSLLFSQILATFSIPDPEAQRREINGICMFFVLVGVTSFITQMLQGYAFSKSGEL
LTRRLRRMGFHAMLGQEVGWFDDHRNSPGALTTRLATDASQVQGATGSQIGMIVNSLTNI
GVAVIISFYFSWKLSLVILCFLPFLALSGGFQAKMLTGFAKQDKQAMEDAGRISGEALNN
IRTIAGLGKEQRFVEMYEAHLEAPYQAAKQKANVYGACYGFAQCVVFMANSASYRFGGYL
VRQEGLHFSLVFRVISAIVTSGTALGRASSYTPDYAKAKISAARFFQLLDRVPKIRVYSN
EGDKWPDFRGNLEFIDCKFTYPTRPDIQVLNGLNVSVKPGQTLAFVGSSGCGKSTSVQLL
ERFYDPDQGQVIIDGHDSTQVNVSYLRSKIGIVSQEPILFDCSIGDNIKYGDNLREVSMN
DIISASKKAQLHDFVMTLPEKYDTNVGSQGSQLSRGQKQRIAIARAIIRDPKILLLDEAT
SALDTESEKTVQEALDKAREGRTCIVIAHRLSTIQNSDIIAVMSRGFVIEQGPHDQLMAL
KGAYYKLVTTGAPIS
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctggatcagtgaaattacacagcatcaaaaagctgggagaagaaaacaatggt
tttgatgaagatccgaacgacgcatacatgatgatggggaacacgaaacaggacacaaag
tctccaaacaagaagaaggaagctgctatcaggattggcttctttcagctgttccgtttc
gccacatgccgggagaccctgatgatggtggggggtagtgtgtgtgccttcctccacggt
tccgcccagcctctcatgctgctggtgttcgggatgctcactgacaccttcatcgagtac
gacatcgagttacaggagctcctggaccccaggaaggaatgtatcaacaacaccatacag
tggaagaaccagtcagtatggacagactggctggacagcaataacactgataagatgaag
aatttaacatgcgggcttctggacattgagtatgagatgaccaattttgcttactattac
gttgccattggatgcgcagttttcttgctaggataccttcaaatctcgttgtgggtgacg
tctgcagcgcgacagatccagatcatcagaaagatgtacttcaggaaggtgatgaggatg
gagatcggctggttcgactgcaactcgactggagagttaaacacacgcatgtcagatgac
atcaacaagatcaatgacgccattgcggatcaagtgagcatctttatccagcgcttcacc
accttcgtgtgcggttttgcgatgggctttgtgaagggatggaagttaacgctcgtcatc
atcgcagccagtcctctaattggagtcggggccgccctcatggctctgtttgtggccaag
ctgacgggtcaggagctgcaggcctatgctaaggctggagccgtggccgacgaggtgctc
acctccatcagaacagtggctgctttcggaggagagctaaaggaagtggaaaggtatgac
aagaacctgatctcagctcagcgttggggcatcaggaagggcctgatcatgggcttcttc
acaggctacatgtggtttatcatcttcctgtgttacgccctggccttctggtacggatcc
agcctagtagtggacacacaggagtacagccccggaacactgttacaggttttctttggt
gtgctgatagcagccctgaacttagggcaggcatctccatgtctggaggcatttgctgca
ggaagaggagctgctaccatcatctttgagaccatcgacagggagccggacatcgactgc
ctctcagaagcagggtacaaactggacaaggtcaaaggggacattgagttccataacgtc
acctttcactacccttccagacctgaagtcgtgatcctggacaagctgagtgtagcagtg
aattctggcgagacgaccgcctttgtggggcccagtggagctgggaagagtaccgccgtg
cagctcatccaacgtttctatgaccccaaggagggcatggtgaccttggatggccatgac
atcagaggcctgaacatccaatggctacgctcgttgatgggcatcgtggagcaggagcct
gtgctgtttgctacaaccatcgccgagaacatccgctacggtcgccccggagtcaccctg
gatgacatcatccacgccaccaaggaggctaatgcctacaactttatcatggacctacca
cagaaatttgacacgctggtgggagagggtggaggtcagatgagcggcggtcagaagcag
cgcatcgccatcgcccgggccttggttaggaacccccggatcctactgctggacatggcc
acctccgctctggacaatgagagtgaggctgtggtacaggaggcactggacaaagtacgc
aatggccgcaccaccatctccatagcccatcgcctgtccaccattaagaacgcagacgtg
atcgtgggctacgagcatgggcgggcggtggagaggggcaagcatgatgagctgctggag
aggaagggtgtttacttcactctggtcaccctacaaagccaaggagacaaggctctcaac
cagaaggccagacagatggcgggccatgacgagccagagcagaagagtttatccagggcc
gggagttacagggccagtctcagatcctctatcaggaagaggacccgctcacagctgtcc
aacctcattccagaagcagaatccttcatatctcaggcagacgcgggcaagagtgccttt
gtggaggaggaagaggtggaggagcaagttgagcctgctccagtgactaggatcctgaag
tacaatgcccctgaatggccctacatgctgtttggaaccatcggagctgctgtcaacgga
ggagtcaacccagtgtactctctgctcttcagtcagattctggcgacattctccatacca
gacccagaggctcagaggagggagatcaatggcatctgcatgttctttgtgctggtcgga
gtgacttccttcatcacccagatgctccaaggctatgccttctctaagtctggggagctg
ctgacaaggcgcttgaggaggatgggtttccacgccatgttgggtcaggaggtgggctgg
tttgatgaccacaggaacagccccggggctctgaccacacggctggccactgatgcctcc
caggtccaaggggccactggctctcagatcggaatgatcgttaactctctgaccaacatt
ggcgttgccgtcatcatttccttctacttcagctggaagctcagcctggtcatcctgtgc
ttcctgccattcctggctttgtccggaggcttccaggctaagatgctcactggcttcgcc
aagcaggacaaacaggccatggaggatgcaggacggatctctggcgaggccctgaacaac
atccgcaccatcgcagggctggggaaggaacagcgctttgtggagatgtacgaggctcac
ctggaggctccgtaccaggccgccaagcagaaggccaacgtgtatggcgcctgctacggc
ttcgcccagtgtgtcgtcttcatggccaacagcgcctcctacaggtttggagggtacctg
gtgcgccaggagggcctccacttcagcctggtcttcagagtgatctcagccatagtgacc
agtggcacagcgctgggccgagcctcttcctacaccccagactacgccaaagccaagatc
tcagctgcccgttttttccagctcctcgaccgcgtgccaaagatccgcgtctacagcaac
gagggggacaaatggcctgatttcagagggaacttagagttcattgactgtaagttcacg
tacccgacccggccagacatccaggtgctgaacggcctcaacgtgtcggtaaagcccggc
cagacgctggccttcgtgggcagcagtggctgtgggaagagcaccagcgtccagctactg
gagagattctatgaccccgaccagggccaagtgattattgatggccatgactcgactcag
gtcaacgtctcgtacctgcgctccaagatcggcatcgtatcccaggagcccattctgttt
gactgcagcatcggagacaacatcaagtacggagacaacctgcgcgaagtcagcatgaat
gacatcatctccgcatccaagaaagcccagctccacgactttgtcatgacactacctgag
aaatacgacaccaacgtaggttcccagggctcccagctctctcggggacagaagcagcgc
atagcaatcgccagggcgatcatccgcgaccctaagatcctgctactggacgaagccact
tcagccctggacacggagagcgagaagacggtgcaagaggcgctggataaagcgagggag
ggccgaacctgcatcgtcatcgcccatcgtctctccaccatccagaactctgacatcatc
gccgttatgtccaggggctttgtcatcgaacagggaccacatgaccagctcatggctctc
aaaggggcctattacaaacttgtcaccaccggtgcaccaatcagctaa
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