KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112237792
Entry
112237792         CDS       T05605                                 
Name
(RefSeq) RNA-binding protein MEX3B
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:otw03019]
    112237792
   04121 Ubiquitin system [BR:otw04121]
    112237792
Enzymes [BR:otw01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112237792
Messenger RNA biogenesis [BR:otw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112237792
Ubiquitin system [BR:otw04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112237792
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 zf-C3HC4 KH_BICC1_1st KH_2 RING_XB3-XBAT31 KH_DEAH11_2nd Prok-RING_4 Mito_fiss_reg zf-RING_5
Other DBs
NCBI-GeneID: 112237792
NCBI-ProteinID: XP_024262168
LinkDB
Position
LG10:complement(70956932..70965099)
AA seq 641 aa
MPSPLFHPEIMDHDMVVSSQHNGVSLPRETDQESRDEGHQEVLRFAMDQLSLMALEKVDC
GGGGGGHVDPLDENQGPVSENCNGGYVNLQLLEHPGGSRESPTSCSPSPEYYGSGGYHMA
GPHSHSMLGEQNSIICNRKRSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKT
PVRGEEPVFIVTGRREDVEMAKREIVSAAEHFSMIRASRCKAGATGTGAPGTGGAIPGPP
HLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSREKDPVFEVTGMPENVD
RAREEIETHITLRTGAFVDLQGDNDFHTNGTDVSLEGLGSLGAALWSRANNHHAAPPPPP
PPPPPPLPLAMHHSSGRKLVSYHQHKGGMGSESYSAPRRATEGDSPTSPFSTGSSSAGGG
GFTPGLPSEELGFEFSAANIWAPFVNGGGGKVPGSSQQQPLRRNSSGLSGGAITPRLSPT
LPPDAVVGPLDHPMARRAQSDPLSALSWLQSGGTVAGTISGGSSSSSGGSSTGYSSCSAS
SLPGGSPTDSEGGGSGVGLASGMLGRLKPAAGSGAGGLIGVGPGGGSRDCFVCFESEVTA
ALVPCGHNLFCMDCAGQICQSAEPECPVCHIPATQCIRIFS
NT seq 1926 nt   +upstreamnt  +downstreamnt
atgcctagccccttattccaccccgagattatggaccacgacatggtagtgagcagccag
cacaacggggtcagcctgccccgagaaacggatcaggagtcccgggacgagggccatcag
gaggttctccgcttcgccatggaccagctgtcacttatggccctggagaaggtggactgt
gggggcggtggtggagggcacgttgacccactcgacgagaaccagggtccagtctccgag
aattgcaacggcggttatgtcaacctgcagttgctggagcacccaggaggctcccgggaa
tccccgacgtcctgctccccgtctccagagtactatggatcgggcgggtaccacatggct
ggcccgcactctcactccatgctcggggaacaaaactcaattatctgcaatcgtaaaagg
agtgtcaacatgaccgaatgcgtacctgtgcccagctccgagcacgttgctgaaatagtg
ggaagacaaggctgtaagatcaaggcactgcgtgcaaagaccaacacctacataaagacc
ccagtgagaggcgaggagcccgtgttcattgtgacagggcgcagggaagatgtggagatg
gccaagcgggagattgtctcggcggcagagcacttctccatgatccgggcgtcccgctgc
aaggctggggccacgggcacaggagcacccgggacggggggagcaatcccaggaccccca
cacctgcctggacagaccaccatacaggttcgggtgccataccgtgtggttgggttagtg
gttggtcccaagggggcgaccatcaagcgcatccagcagcagacccacacctacatcgtg
acacccagtcgggagaaggaccctgtgttcgaggtgacgggcatgccagagaatgtggac
cgagcccgggaggagatcgagacgcacatcaccttgcggaccggggccttcgtggacctc
cagggagacaacgactttcacaccaacggaaccgacgttagcttagagggcctgggctcg
ctgggcgctgctctctggtctcgggccaacaaccaccatgctgcccctccacccccacct
cctcctccaccaccgcccctcccgctggccatgcaccactcatctgggaggaagctggtc
tcctaccatcaacataagggagggatgggctctgagagctacagcgcccccaggagggcc
acagagggagacagcccaaccagccccttcagcacaggctccagcagtgctggaggaggc
gggttcacccctggcctcccctctgaggagctgggctttgagttcagcgccgccaacatc
tgggcacccttcgtcaatggaggaggagggaaggtcccaggctcctcccagcagcaacct
ctccgccgaaacagcagcggcctgagtggaggcgccatcacaccccgcctgtcccccacc
ctgccccctgatgccgtggtgggacccctggatcatcctatggcccgccgggcccagagc
gaccccctcagtgccctctcatggctgcagtcgggcggtactgttgcagggaccatctcc
ggaggatctagctccagctccggaggctcatccaccggttactcctcctgctcagcctcc
tccctgcccggaggctctcccacagactcagagggcgggggcagtggagtgggcctggcc
tctggcatgctgggccggctgaagcctgcggcaggctctggggctggaggtctgattggt
gtagggccagggggcgggagcagggactgttttgtgtgctttgagagtgaggtgacagcg
gccctggtgccctgcggccacaacctcttctgtatggactgcgccggacagatctgccag
tccgctgagcccgaatgccctgtctgccacatccctgccacacagtgcatccgcatcttc
tcctaa

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