Oncorhynchus tshawytscha (Chinook salmon): 112237964
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Entry
112237964 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112237964
04121 Ubiquitin system [BR:
otw04121
]
112237964
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112237964
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112237964
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112237964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
Zn_ribbon_19
zf-C3HC4_3
C1_2
zf-RING-like
DUF7560
Zn_ribbon_PaaD
HypA
Motif
Other DBs
NCBI-GeneID:
112237964
NCBI-ProteinID:
XP_024262331
UniProt:
A0A8C8GD30
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MAEAAAAQQHRFFCHCCKGEIDPKFPEFTCPRCESDFIEELSEDSSLLENSSTAEANDNA
GTLFSELWQLLFMERSALLSDPSAYESDPSHLQAAPASDAVEDELEGPSVGTEPLEPEPE
RPSRPPSQGRRQSRAPAVESIVQQFLAGLFANNGNPGVAPAALSGMFHSNPGDYAWGQGG
LDAVITELLGQFESTGPPPAEKEMISSLPTVNISQEQTGGFQPSRNTKPTASMGEEDTRL
ECPVCREEYTVGESVKQLPCLHYFHSDCIVPWLKLHDTCPVCRKSLDGVDQSIQPPPEPP
EPPSIRTDPQGERRAI
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagctgcggcacaacaacaccgctttttctgtcactgctgtaaaggtgaa
atcgaccctaaattcccagaattcacttgccccaggtgtgagtccgatttcattgaggag
ttgtcagaagactccagtctcttggagaacagcagcactgcagaggccaatgataatgca
ggcacactcttttcagagctgtggcagctgctgtttatggaacgctctgctctcctctcg
gacccctccgcctatgagtctgacccgagccatctacaggctgccccagccagtgatgca
gtggaggacgaacttgagggcccttctgtgggcacagagcctttggagcctgaaccggaa
cgcccctctcgcccgcctagccaggggaggcgacagtcccgcgcgccagcagtggagagt
attgtgcagcagtttttggctggcctgtttgccaacaatggaaatccaggtgtcgcacca
gctgcactgtctggcatgttccattcaaatccaggggactatgcctggggtcagggaggt
ctagacgcagttatcacagaattgttaggtcagtttgagagcacaggtccacctcctgca
gagaaggagatgatctcatccctccccacagtcaacatctctcaagaacagacaggtggg
ttccaaccaagccgcaacaccaaacccacagcatctatgggagaagaggacacaagactg
gagtgtccagtatgtagggaggagtacaccgtgggagagtctgtcaaacagctgccctgc
ctccattatttccacagtgactgcatagtgccatggctcaaactgcacgatacctgtcct
gtgtgtcgtaaaagtcttgacggcgtcgaccagagcatccagcccccaccagaaccccca
gagcccccctccatcaggacagaccctcagggggagagacgggctatttga
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