Oncorhynchus tshawytscha (Chinook salmon): 112237974
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Entry
112237974 CDS
T05605
Name
(RefSeq) rho guanine nucleotide exchange factor 7 isoform X1
KO
K13710
Rho guanine nucleotide exchange factor 7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112237974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112237974
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112237974
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
RhoGEF67_u1
SH3_2
SH3_9
SH3_1
CH
PH
SOS1_NGEF_PH
DUF7491
AsnC_trans_reg
Motif
Other DBs
NCBI-GeneID:
112237974
NCBI-ProteinID:
XP_042179811
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Position
LG07:complement(3371301..3401405)
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AA seq
869 aa
AA seq
DB search
MNSAEQTVTWLITLGVLESPKKTISDPEGFLQSSLKDGVVLCKLVERLRPGSVEKIFQEP
RNDSEFQSNIKEFLKGCGSFRVEPFEVNDLLQGLNFTKVLNSLVALAKATEDIGVGSDSV
CAHHSSSLRIKSFDSLNTQSPRGRSSKLLHNQYRSLDMSESGGQRVLVRAKFTFQQTNED
ELSFNKGDMISVSRQEDGGWWEGSFNGNKGWFPSNYVKEVKGSDNPVSPKSGTLKNPVKG
FDTPAVSKTYYNLVLQNILETETEYSKELQSLLTSYLHSLQPTDKLSSADVSHILGNLED
ISTFQLMLVQSYEECTRLPESQQRVGGFFLNLLPQMKALYMAYCSNHPSAVNILTEHSEE
LGEFMEGKGASSPGILTLTTGLSKPFMRLDKYPTLLKELERHMEGHHPDRPDIQKCLTSF
KSLSAQCQEVRKRKELELQILTETIRRWEGDDIRTLGPVLYMSHTLCHTHGSEEKSERYL
LLFPNVLLLLSASSRMSGFIYQDKLPLTGMLISRIEDCELVKNAFEISGSTCERMQVVCN
NQQDLQEWVEHLSRHTQIRNAPSVIMTTPTAKPQSVPCHTLPSHPLTPSRHSESRGVSAG
PAYHTLPHPSSHGVPQTPPMWGPLEPPSTPKPWSLSCLRPAPPLKPSAALCYKEDLSKSP
KSMKKLLPKRKPERKASDEDFATRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSTWQGT
DLMHNHVLAEPVDRSSVDTIGCRSSLSRGTEPWSDLSEDSDYDSIWTASSYRTSSVSRSR
EKSGLHMLFPEEEKIIVEETKSNGQTVIEEKTLVDTVYGLKDEVQELKQDNKMMRRTLDE
EQKARKELEKILRRVLKNMNDPTWDETNL
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaattcggcggaacagacggtaacgtggctgataacgttgggggtcttggagtcaccg
aaaaagaccatttctgaccctgaaggattcctgcagtcttctctcaaagatggggttgtc
ctgtgcaagctggtggagcgattgcgccctggttctgttgagaaaatcttccaagaacca
aggaatgatagtgagttccagagcaatataaaggagtttctgaaaggctgcgggtccttc
cgagtggagccatttgaggtcaatgaccttctccagggactgaacttcaccaaggtgctc
aactctctggtggcactggccaaagccaccgaggacataggagtgggcagtgactctgtg
tgtgcgcatcactcatcctcgttacgaatcaagtcgtttgactctctgaacactcagtct
ccccgcgggcgctcctccaagctcctccacaaccagtaccgcagcctggacatgtcggag
agcggtgggcagcgggtactggtgagggccaagttcaccttccagcagaccaatgaagac
gagctgtccttcaacaagggtgacatgatcagtgtgtcgcgccaggaagacggcggctgg
tgggagggctcgttcaacggcaacaagggctggttccctagcaactatgtcaaggaggtc
aaaggcagcgacaacccagtgtctcctaagtctggcaccctcaaaaaccctgtgaaaggc
tttgacacaccagctgtcagcaagacctactataacctggtgctccagaacattctagag
accgagaccgagtattccaaggagctccaaagcctgctgacctcatacctgcactcactg
caacccacagacaagttgagcagtgcagacgtcagtcacatcctggggaatctggaggac
atctctaccttccagctgatgttggttcagtcctacgaggaatgtaccaggcttccagag
agccagcagagagtagggggcttcttcctcaacctgctgccccagatgaaggctctctac
atggcctactgctccaaccacccctcagctgtcaacatcctcacagaacacagtgaggag
ctgggggagtttatggaggggaagggagccagtagtccaggtatcctgaccctcaccact
ggtctcagtaaacccttcatgaggctggacaaataccctacactgctgaaggaactggag
agacacatggaggggcatcatcctgatcgaccagacatccagaagtgtttgacctccttc
aaaagcctctctgcccagtgtcaggaggtgaggaaacgtaaggagctggagctgcagatt
ctaactgagacgatcagacgctgggagggagatgacatcagaaccctgggccctgtcctg
tacatgtcacacacactctgccacacacacggatcagaggagaagagtgaacgctacctc
ctgctgttcccaaatgttctcctactgctgtctgccagctccagaatgagtggattcatc
taccaggataagctgccattgacaggaatgcttatctcaaggatagaagattgtgagttg
gtcaaaaacgctttcgaaatatcaggcagtacgtgtgagcggatgcaggtggtgtgtaac
aaccagcaggatttgcaggagtgggtggagcatctgtcgagacacactcagatcagaaac
gccccctccgtgatcatgaccacacccaccgccaagccccagtctgtcccctgccacacg
ctcccgtcccatcccctgaccccctccagacactcagagagtaggggtgtatctgcgggc
cctgcttaccacaccctaccccacccctcttcccacggggtccctcaaaccccccccatg
tggggtcccctggagccccccagcacccccaaaccctggagcctcagctgcctccgcccc
gcgcccccacttaagccctcggcagcactctgctataaagaggatctgagtaaaagtcct
aagagtatgaagaagctgctgcctaaacgtaagcctgagaggaaagcttcagatgaggac
tttgctaccaggaagagtactgcagctctggaggaggatgcccagatcctgaaagtgatc
gaggcctactgcaccagcgccaaaacacggcagacactcaactcaacatggcagggtact
gatttgatgcataaccacgtgctggccgagccagttgaccggtccagtgtggacactata
ggttgccgtagcagcctgtccagagggaccgagccctggtctgacctatcagaggactcg
gattatgacagtatttggaccgccagtagttacaggacctcctccgtttctcgatccaga
gagaagtcaggtctgcacatgctcttccctgaggaggagaagatcatcgtggaggagacc
aagagcaacggacagactgtcatcgaggagaagactctagtagacacggtgtatgggctg
aaggatgaagtgcaggagctgaaacaggacaacaagatgatgaggaggaccctggatgaa
gagcagaaagccaggaaggagctggagaagatcctgaggagagtcctgaagaacatgaat
gaccccacctgggacgagaccaacctgtga
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