Oncorhynchus tshawytscha (Chinook salmon): 112237980
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Entry
112237980 CDS
T05605
Symbol
emilin1a
Name
(RefSeq) EMILIN-1a isoform X1
KO
K24246
emilin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112237980 (emilin1a)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
112237980 (emilin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMI
C1q
Collagen
Baculo_PEP_C
Apolipoprotein
DUF1664
ATG17_like
DUF4407
Tektin
IFT57
Uso1_p115_C
BLOC1_2
Collagen_mid
ACBP4_C
NPV_P10
MG280
Perilipin
Motif
Other DBs
NCBI-GeneID:
112237980
NCBI-ProteinID:
XP_042177341
LinkDB
All DBs
Position
LG05:6757197..6811477
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AA seq
1065 aa
AA seq
DB search
MESSLMYLFLSLTLPGVIWRASSNPSLNNLQPALSQSSPNGGRVASRHRNWCAYVVTRTI
SCVMEDGVETYVKPDYQRCAWGQCSRVMAYRTYRRPRYKVAYKMVTEMEWKCCHGYSGDD
CYDGPTGTGDSQVTAGRPHVTQTGYNNGAEQKGGEGDNDKMRQMEETIQRLTKDLRDIQS
TMTGMNLRLQDGTKRPGLNGDRTPADAAKPMKETIHYIQTKLDQLDNRTQVHDQTLLSIN
NHLVNGDRGSRGNELDGAVTGKMDAMKEEILRELERRVSLSCSSCQSGVENIRKQQKSDQ
ERISALEKLLSSMEQHYRHNMDVTRREMERTQGCCNTVTEMDRRLTTTEGKFNATAQDYD
VIKERLDKELGGGSGEGGGGGEKGGRTKVTEEKLNSRLREVERRLNNTVRKTEQKLTNTG
NNMKDNLQREVTTIRNIVLSHMDDHGYRIGKVELDLTVLTDTVTDHSRRLGQLENTTNFI
DTKLSRTVDMCSETCGPNGKGRKTEDMVKTLEWRVVANKEDIQKFDTRLKDLSLTGDSII
DRVVELSNDVKKIKGLTGEDGERFNQIVTEVETLGRSVDDCSICSTVERDLQSFTNSTNN
AIGRCQKELTNLRNRFDSEDSSCSQLCSNLQEEVGRLKEEVGRLKEEVEECTGKCKTALT
ELKKNLDGQTTLHGRLGTDLKSIQGELSKFTIRFTTLNDSVKGLGHTVQSHGNTITDLGS
TKDNIMSELDHVQTELDEHVKDTRGRFTDLGREIKTITSQYVTEIGECWRSGDGLDKRLS
KMEDVCGRLDGVSNSLAKIKEGLNRHVSGLWNCVNTLNSTVIFHDESIDNIQHVQLPDVH
SDINRLNTSVLNVLEEFHSFKQQDFVGSPGLPGPRGERGYSGLPGPKGPQGREGPQGKPG
KEGPLGPPGLRGEEGPAGSDSHVPRLSFSAALTRPQARAGTIVFNKIFVNEKDVYNPGTG
YFTAPVSGKYFFSATLTGHKNVKIEAVLSKSNYGVARGDSAGYQPEGLEKPMAEARHTPG
ALAVFNIILPMKAGDTVCIDLVTGKLAHSSEPLTIFSGMLLYETV
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgtcgcttatgtacctgtttttatcgttgacgttacctggagtcatttggcgt
gcgtcttcgaatccctcgctgaacaatctccaaccggctctgagccaatccagtccaaat
ggggggagagtagcgagcaggcacaggaactggtgtgcctacgtggtgacacgcaccatc
agctgtgtaatggaggacggggtggagacgtatgtgaagccagactaccagagatgtgcc
tggggacagtgttccagagtgatggcgtatcgtacgtaccggaggcccaggtacaaggtg
gcctataagatggtgacagagatggagtggaagtgttgtcatggttactccggggatgac
tgctatgatggtccaacggggaccggggacagccaggtcacagcgggacgacctcacgtc
acacagaccggatacaacaatggagctgagcagaagggaggagagggtgacaatgacaag
atgagacagatggaggagactattcagaggttgaccaaggacctccgtgacatacagtcc
accatgacgggcatgaacctgaggctccaagacggaactaagaggccaggcctgaatgga
gacaggacccctgcagacgcagccaagcctatgaaagagaccatccactacattcagacc
aaacttgaccaactggacaatcgcacacaggtccacgaccagaccctgctgtccatcaac
aaccatttggtcaatggtgacagaggttcccgcggcaatgagctagacggggctgtcaca
ggcaagatggacgccatgaaggaggagatcctccgcgagctggagaggagggtcagtctg
tcgtgctcctcctgccagagtggggtggagaacataaggaaacagcagaagagtgaccag
gagaggatcagtgctctggagaagttgctgagttccatggagcaacactatcgccacaac
atggacgtcaccaggagggagatggaacgtacacagggctgctgcaacactgtcacagag
atggacaggaggctgaccaccacggaggggaagtttaacgccacagcacaagactatgat
gtcatcaaagagcgcctggacaaggagctgggtggtgggtcgggtgaaggaggaggagga
ggtgagaaaggagggaggacgaaggtgacggaggagaagttgaacagtcgactgagggag
gtggagaggaggctgaacaacacggtgaggaagacagagcagaagttgaccaacacagga
aacaacatgaaggacaacctgcagagagaggtcaccaccatccgtaacatagtcctcagc
cacatggatgaccacggctacaggataggcaaggtggagctggacctcacagtcctgacg
gacacggttaccgaccacagccgacgactgggtcaactagagaacacaacaaactttatc
gacaccaaactgtcgaggacagtggacatgtgctccgagacctgcggccccaacgggaag
ggccgtaagacagaagacatggtcaagaccctggagtggagagtagtggccaacaaggag
gacatccagaagtttgataccagactcaaggacctatcgctgactggcgactctataata
gacagagtggtggagctcagcaacgacgttaagaagatcaaaggattgacgggggaggac
ggcgagcgcttcaatcagatagtcacggaggtggagacgctggggcggagcgtggacgac
tgctccatctgtagcacagtagaacgagacctgcagtcgttcaccaacagcaccaacaac
gccatcgggaggtgccaaaaggaactgaccaacctgcgcaacaggtttgactctgaggac
tcttcttgttcccagctgtgctccaacctgcaggaggaagtggggaggctgaaggaggaa
gtggggaggctgaaggaggaagtggaggagtgcacagggaagtgtaagaccgccctgacg
gaactaaagaaaaacttggacggacaaacgaccctccacggacggttggggacggacctg
aaatccatccagggggaactatccaagttcaccatcaggtttactaccctgaatgactct
gtgaaggggctaggtcatacagtccagagccatggcaacaccatcacagacctgggctct
accaaggataacatcatgtctgagttggaccacgtgcagacagagctggacgagcacgtc
aaggacaccagggggcgcttcactgacctgggtcgtgagataaagaccatcaccagtcaa
tacgtgacggagattggggagtgttggcggtccggggacgggctggacaagaggctttcc
aagatggaggacgtctgtggccggctggatggtgtctccaacagcctggccaagatcaag
gaggggctgaacagacacgtgtcagggctgtggaactgtgtcaacacgctcaactctacg
gtcatcttccacgacgagtccatcgacaacatccagcacgtccagcttccagacgttcac
tctgacatcaacaggctcaacacctctgtcctcaacgtcctcgaggagttccacagcttt
aaacaacaggactttgttggttcccctggtctgcccggtccgagaggagagaggggctac
tctggactccccgggccaaagggaccccaaggaagagaagggccccaaggcaaacctggc
aaagaggggcccctgggacctccaggtctgagaggtgaagaaggtccagcaggatcagac
tcccacgttcctcgtctgtccttctcagcagctctgacccgccctcaggccagggctgga
acgatagtcttcaacaagatctttgtcaatgagaaggatgtctataacccaggcacaggt
tacttcacagccccagtgagtggtaaatatttcttcagcgctaccctgacaggccataag
aatgtgaagattgaggctgtcctatctaagtctaactacggagtggcgcgtggggactct
gcaggctaccaaccagagggactggagaaacccatggcggaggccagacacacgcccgga
gccctggctgttttcaacatcatcctccctatgaaggcgggagataccgtctgtatcgac
ctggtcaccgggaaactagcccactcctcagaacccctcaccatcttcagcgggatgctg
ctgtatgagaccgtctga
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