Oncorhynchus tshawytscha (Chinook salmon): 112237992
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Entry
112237992 CDS
T05605
Name
(RefSeq) estrogen-related receptor gamma isoform X1
KO
K08554
estrogen-related receptor gamma
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112237992
03029 Mitochondrial biogenesis [BR:
otw03029
]
112237992
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112237992
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
112237992
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
112237992
Nuclear receptors [BR:
otw03310
]
3. Estrogen like
3B. Estrogen-related receptor
112237992
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
GAT
P4Ha_N
Motif
Other DBs
NCBI-GeneID:
112237992
NCBI-ProteinID:
XP_042181421
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All DBs
Position
LG08:complement(37226842..37347373)
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AA seq
509 aa
AA seq
DB search
MDSIELSLPEYFSLHSEQEMNLSKAQVNSEDKYGKCGSAWRMQQTYDLDATHMRDAHALY
NPRLLCRMSSKERHLESNCPSYIKTEPSSPASLADSINHHSPGGSSDASGSYSSTMNGHQ
NGLDSPTLYGPGAGPLGPAGASKRYEDCSSTIGEDSQIKCEYMLNSMPKRLCLVCGDIAS
GYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLNVGMMRE
GVRLDRVRGGRQKYKRRIDAENSPYLNPQLALPAKKPFPFGCLADNKIVSHLLVAEPEKI
YAMPDPTVPDSDIKALTTLCDLADRELVVNIGWAKHIPGFSTLSLADQMSLLQSAWMEIL
ILRVVYRSLSFEDKLVYAEDYIMDEDQSKLAGLLDLNNAILQLVKKYKAMKLEKEEFVTL
KAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHPEDPRRAGKLLMTLPLLRQTST
KAVQHFYSIKQDGKVPMHKLFLELLEAKV
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggattccatagagctttcccttcctgagtatttctccctacactctgaacaagaaatg
aacttatcaaaggcccaggttaatagtgaagataagtacggcaaatgtggcagcgcgtgg
agaatgcaacagacttacgacctcgatgccactcacatgcgtgacgcacatgcactttat
aacccaaggctcctctgcagaatgtccagcaaagagcgccacctagagtccaactgccca
tcctacattaagacagagccctccagccccgcctccctggcagacagcatcaaccaccac
agccctgggggctccagcgacgccagcggctcctacagctcaaccatgaatggccaccag
aacggcctggactcccccaccctgtacgggcctggtgccggacctctgggccccgcgggg
gcctccaagcgctacgaggactgctccagcaccatcggggaggactcgcagatcaagtgc
gagtacatgttgaactccatgcctaagcggctgtgcctggtgtgtggcgacatcgcctcg
ggctaccactacggcgtggcctcctgcgaggcctgcaaggccttcttcaagaggaccatc
caagggaacattgagtacagctgccctgccaccaacgagtgtgagatcaccaagaggaga
cgcaagtcctgccaagcctgtcgcttcatgaagtgtctaaacgtcggcatgatgagagaa
ggtgtgcgtctggacagggtgcgtgggggcagacagaagtacaagcgccggatagatgct
gagaacagcccttacctcaaccctcaactggccctgcctgccaaaaagccatttcccttt
ggctgccttgcagataacaaaatcgtgtcccacctgctggtggccgagcctgagaagatc
tacgccatgcctgaccctaccgtccccgacagtgacatcaaggccctgaccacgctgtgt
gacctagctgaccgcgagctggtggtcaacatcggctgggccaaacacatcccaggtttc
tccacgctgtcgctggcagaccagatgagtctactgcagagtgcgtggatggagattctg
atcctgcgtgtggtgtaccgctcgctgtccttcgaggacaagctggtgtatgctgaggac
tacatcatggacgaggaccagtccaagctggcaggtcttcttgatctcaacaacgccata
ctgcaactggtgaagaaatacaaagccatgaagctggagaaggaagagtttgtcactctc
aaggctatcgctctggctaactcagactccatgcacatagaggacgtggaggcggtgcag
aagctccaggacgtgctccatgaggccctgcaggactacgaggcgggccagcacccggag
gaccctcgtcgggcaggcaagctgctgatgaccctgcctctgctccgccagacctccacc
aaggccgtgcagcacttctacagcatcaagcaggacggcaaggtccccatgcacaaactc
ttcctggaactgctggaggccaaggtctga
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