Oncorhynchus tshawytscha (Chinook salmon): 112238023
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Entry
112238023 CDS
T05605
Name
(RefSeq) zinc finger protein ZIC 1
KO
K09224
zinc finger protein ZIC 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112238023
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
112238023
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GFIT
Motif
Pfam:
zf_ZIC
zf-C2H2
zf-C2H2_15
zf-H2C2_2
zf-C2H2_4
zf-C2H2_8
zf-C2H2_jaz
zf-met
zf_C2H2_17_2
Zap1_zf1
zf-C2H2_6
zf-C2H2_16
Motif
Other DBs
NCBI-GeneID:
112238023
NCBI-ProteinID:
XP_024262387
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Position
LG16:complement(1783341..1787859)
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AA seq
443 aa
AA seq
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MLLDAGPQYPTIGVTTFGSSRHHSTGEVTEREVALGINPFADGMGAFKINHSSHDLSSGQ
TAFSSQAPGYAAAALGHHHHPTHVSSYSTAAFNSTRDFLFRNRGFGDATSAQHSLFASAA
GSFAGPHGHSDATGHLLFPGLHEQAASHASSNVVNSQMRLGFTGDMYGRADQYAHVTSPR
SDHYASSQLHGYGPMNMNMAAHHGAGAFFRYMRQPIKQELICKWVEPEQLSNPKKACNKT
FSTMHELVTHLTVEHVGGPEQSNHICFWEECVREGKPFKAKYKLVNHIRVHTGEKPFPCP
FPGCGKVFARSENLKIHKRTHTGEKPFKCEFDGCDRRFANSSDRKKHMHVHTSDKPYLCK
MCDKSYTHPSSLRKHMKVHEATTQGPQPSPAASSGYESSTPPTIVSPSTENHNSSSISPA
ASTVHHTTSHHTTLSSNFNEWYV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggacgcaggaccccagtaccccaccataggagtcactacgtttggctcctca
aggcatcactcaacaggcgaagtaacagaacgggaagtggctttggggataaatccattc
gcagacgggatgggcgcttttaaaatcaaccacagctcccacgaccttagctccggccag
acggcgttctcctcccaggctcccggctatgctgctgccgctctgggtcaccaccaccac
ccgacacacgtcagctcctactccacggcagcattcaactccacccgggactttctcttc
agaaaccggggcttcggagacgcaaccagcgcgcagcacagcctgtttgcctccgcagcg
ggaagttttgcagggccacatggacactccgatgccaccgggcacctgctcttccccgga
ctccacgagcaagccgccagccatgcgtcatctaatgtcgtcaacagccagatgcgcctt
ggctttaccggggacatgtacggccgggctgaccagtatgcccacgttacgagcccccgc
tccgaccactacgcctcctcccagctgcatggctatggccctatgaacatgaacatggcg
gctcaccacggggcaggggcctttttccgatacatgaggcagcccatcaaacaagagctc
atctgtaagtgggtcgagcccgaacagttgtcgaaccccaaaaaggcttgcaacaaaact
ttcagcacgatgcacgagctcgtgacccacctgacagtggagcatgtcggtggaccggag
cagtctaaccatatctgcttctgggaagagtgcgtccgagaaggaaaaccgttcaaagcc
aaatacaaactggtaaatcatatcagagtacacaccggagagaaaccattcccatgtccc
ttccccggctgtggaaaagtgtttgcccgatcggaaaatctaaaaatccacaaaaggact
cacacaggtgagaagcctttcaagtgtgagtttgatggctgcgacaggcggtttgccaac
agcagcgaccggaagaaacacatgcacgtccacacttctgacaagccttatctctgcaag
atgtgcgacaagtcctacacacatcccagctctctgcggaaacacatgaaggttcacgag
gctaccacgcaaggacctcaaccgtcgccagcggccagttccgggtacgaatcgtccacg
ccgcccaccatcgtgtctccgtccacagagaaccataattccagttccatatcaccggca
gcctcgacagtacaccacacgaccagtcaccacaccacgctgtcgtcaaattttaatgaa
tggtacgtgtaa
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