Oncorhynchus tshawytscha (Chinook salmon): 112238054
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Entry
112238054 CDS
T05605
Name
(RefSeq) protein sidekick-2
KO
K16353
protein sidekick
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112238054
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
Other
112238054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
FN3_DSCAM-DSCAML_C
Ig_3
I-set
Pur_ac_phosph_N
Ig_2
Fn3_VIN3
ig
V-set
CRLF2-like_D2
Ig_RIMBP2
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
112238054
NCBI-ProteinID:
XP_042172860
LinkDB
All DBs
Position
Unknown
AA seq
1996 aa
AA seq
DB search
MVITWRKDGVVVSTGIRDFGRRLTISLPAVSDSGYYECEATLRSSTVPPVNAGAYLHVLD
HPQFVKEPVQHISAEMEKVVDIPCQARGVPQPDIVWYKDAVVISPVKMPRYRVLVGGSLQ
INGLLPDDTGMFQCFARNLAGEIQTNTYLAVTSIAPNITAGPADSAVIDGMSVILHCETS
GAPRPAITWQKGERVLASGSVQLPRFTLLESGSLLVSPSHLSDAGTYTCMASNSRGIDEA
AADLLVWARTRITKPPVDQSVIKGTKAVMSCGVTHDPSVFVRYVWEKSGSVVDVSTSPRL
RLDPDGTLHLSQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAPEIPSAALSQVEKR
AINLTWAQAFDGNSPLIRYILEVSENNAPWTVLLANIEPEWTGVTVGGLIPARSYQFRLC
AVNDVGRGQFSKETDRLSLPEEPPSAPPQTVIASGRTNQSIMIQWQPPPESHQNGPLQGY
IIRYCLSGLPVDCQMKNITRPDQNNLLLEDLIIWTNYEMEVAAYNRAGRGTYSHKVTEWT
LQGVPTVPPGNVQAEPFNSSTVRLTWSAPSPQFINGINQGYKLLAWEAGQEEDVTMVTVR
PNFQDSVHVGYVTGLKKFTEYYTSVLCFTTPGDGPRSPPHRLRTHEDKPGAVGHLSFTEI
LDTSLKVSWKDPNEKNGVLTGYRISWEEFNRTNTRVTHYLPNLTQEYRVTGLTALTTYTI
QVAGMTSKGQGQLSSSTISSGVPPEMPGPPTNIAISNIGPRSVALQFKPGYDGKTSISRW
QVEAQIGIIGENEEWVMVHQLPNEPDARSLEVLDLNPYTSYRFRMRQVNIVGTSPPSQPS
RKIQTLQAPPDISPYNVTLRTASETSLWLRWVPLPEWEYNGDQELVGYRVQYSRETSKEG
VLSHVISDRLEREFTIEDLEEWTEYEVRVQAINGLGSGPWSQPVQGRTRESVPSCGPTNV
SAFATTSSSILVRWGEVPQTDRNGLILGYKVVYKDRGSDSVPQYWEVEGNTSHSVQLSGL
GKYVLYEIQVLAFTRIGDGRSSRPSILERTLDDVPGPPVGILFPEVRTGSVRLIWQPPAQ
PNGIILAYQITHRRNTSNSNAATVDVLSPSARQYTASGLKPESVYVFRLTAQTRKGWGEA
AEALVVTTEKRARPQPASCPTVPQEDVQARSVMLSWEPGSDGLSPVRYYTVQYRELPDSN
WTVHSASVNHEASSYIVDSLKPFTSYQFRVKATNDIGDSEYSQESEAVTTLQDAPDKAPT
ILSVTPHTTTSVLVRWEPPAEKLINGVLLGFRVRYRELQYDRLRSFTIRTINSPASNWAE
LTAPYSVRNLSESSLTQYELDNLSKHKRYEIRLSVYNAVGEGPTSTPQEVFVGEAVPTAP
PQSVTIQSSTATQLDVTWSPPPLDSQNGDIQGYKIYFWEFQLQNETERLRTMFLPELGVK
IKNLTGYTTYMISVAAFNAAGDGPRSPPTRGRTQQAAPSRPSFLHFSELTTTSVNMSWGE
PGQANGIIEGYRLVYEPCTPVDGVSKIVTVDVKGSTPLWMKIKDLADGVTYNFRIRAKTL
TYGPEVEANITTGPGEGAPGPPGEPFISRYGTALTLHWTSGDPGRAPITRYVIEARPSDE
GLWDILIKDIPKEVTSYTLNLDMLREGVTYDFRVIGVNDYGYGSPSAPSPSISAQKVSPF
YEEWWFLVVIALVGLIFILLLVFILIIRGQSKKYTKKADSVSSYPHLGSHSNSTSLPLSH
GEMVRLDEGRFPALELNNRRLSVKNSFCRKNGIYTRSPPRPSPGSLHYSDEDVSTKYNDL
IPAENSSLTEKHSEISDSQGSDSEYEVDQNRDGQQKTHSFVNHYISDPTYYNSWRRQQKG
VSRPPAYGYTQPEPLHPQPLAEQDPIQPTTNTTPRHPPPLPPLPPLLPRALSPSPQPQGL
QGLRSQGGLIQGLAPQGQGTLFRPKGSRTPTPSLLSCSVSEPPSQHGTLLYSSRPPSSLG
CSSTQQPPTAGFSSFV
NT seq
5991 nt
NT seq
+upstream
nt +downstream
nt
atggttataacctggcgtaaggatggtgtagtggtcagtacagggatacgtgactttggc
cgcaggctgaccatcagcctaccagcggtcagtgacagtggttactatgaatgtgaggcc
accctccgcagcagcactgtgcctccggtcaacgcaggggcctacctacatgttctagac
catccccagtttgtgaaggagcctgtccaacacatcagtgcagagatggagaaggtggtg
gatatcccctgccaggcacgaggtgtcccccagccagacatagtgtggtataaggatgct
gtggtcatcagcccagtgaagatgcccaggtacagggtgttagttggaggcagtctgcag
atcaacggtttgttacctgatgatacagggatgttccagtgctttgcccgcaacctggct
ggagagatacagaccaacacctacctggctgtcaccagtattgctcccaacatcacggca
ggtccagctgacagtgctgtgattgacggcatgtcagtcatcctccactgtgagaccagc
ggagccccgcgaccagctatcacctggcagaaaggtgaacgtgtgttggccagtggttct
gtccagctgcccaggttcaccctgctggagtcaggcagtctactggtctccccgtctcac
ctctctgatgctgggacatatacctgcatggccagcaactccagaggcatagacgaggcc
gccgcagatctactggtgtgggcacggacccgtatcaccaagccacctgttgaccagagt
gtcatcaaggggaccaaggctgtcatgtcttgtggggtgacccatgaccccagtgtgttt
gtcaggtatgtttgggagaagagtggttcagtggtggatgtgagcacctctccccggctc
cgtctggaccctgacgggaccctgcacctctcccagacctggtcaggtgacatcggaaca
tacacctgtagagtcacctctgtagggggcaacgactcacgcagcgctcacctcagagtc
aggcagcttccccatgctccagagatccccagtgcagctctgagccaggtagagaagagg
gccatcaatctgacctgggctcaggccttcgatgggaacagccccctgatccgatacatc
ctggaggtctcagagaacaatgccccgtggacagtgctcctggccaatattgaaccggag
tggaccggggtgaccgtgggtggtttgatcccagcacggtcctaccagttcaggctgtgt
gcggtcaatgacgtgggcaggggacagttcagcaaggagactgaccgactctctctacca
gaggagcctcccagtgcccctcctcagacggtgattgccagtggtcgtaccaaccagtcc
atcatgatccagtggcaaccacccccggagagccaccagaatggaccgctccagggatac
atcatcaggtactgtctgtcaggactaccagtagactgtcagatgaagaacatcaccagg
ccagaccagaataacctactcctggaggacctcatcatctggactaactatgagatggag
gtggcagcctacaacagggctgggaggggtacctacagccacaaggttacagagtggacc
ctgcagggagtccccactgtcccaccaggtaatgtccaggctgagccattcaactcctct
acagtcaggctgacctggtcagctcctagccctcagttcatcaatggcatcaaccaggga
tacaagctgttggcgtgggaggcgggtcaagaggaggatgttaccatggtgacagtgaga
cctaacttccaggacagcgtgcatgtgggctacgtgactggactgaagaagttcacagag
tactacacctctgtcctgtgtttcactacacctggagacggccctcgcagcccacctcac
agactacgcactcacgaagacaagcctggtgccgttggtcacctgagctttacagagatc
ctggacacatctctgaaggtcagctggaaagatcccaacgagaagaatggagtcctcaca
ggctaccgtatctcgtgggaggagtttaaccggaccaacacccgggtcacccactacctc
cctaacttgacccaggagtaccgggtcaccgggctgaccgccctcaccacctacaccatc
caggtggctgggatgacctccaagggacagggtcaactctcttcttctacaatatcatct
ggagttcccccagagatgccgggcccaccaaccaacatagccatctccaacatcggcccc
cgctctgtagccctgcagtttaaacctggctatgacggcaagacgtccatctcacgctgg
caggttgaggcacagattggtataatcggggagaatgaggagtgggtgatggtccaccag
ttgcccaacgagcctgatgcccgctccctggaggtcctggacctgaacccctacacctcc
tataggttccgtatgcgtcaggtgaacatagtggggaccagtcctcccagccagccctcc
aggaagatccagaccctgcaggcgcctccagatatctccccctacaacgtcaccctccga
acagcctcagagaccagcctctggctccgatgggtgcctcttccagagtgggagtacaat
ggtgaccaggagttggtgggttaccgggttcagtactccagagagacatctaaggaaggg
gtcctgtcccacgtcatcagtgaccggctggagagggagtttaccatagaggacctggag
gagtggacagagtacgaagtcagggttcaggccatcaatggcttgggctctgggccctgg
agccagcctgtccagggcagaaccagggagtctgtgccgtcctgtggtcccaccaatgtg
tcagccttcgccacgacttccagcagcatcctggtccgctggggggaggtccctcagact
gaccgcaacggactcatcctgggatacaaggtggtgtataaggacaggggttcagactct
gtccctcagtactgggaggtggaggggaacaccagccacagtgttcagttgagtggtctg
gggaagtacgtgctgtatgagatccaggttctggccttcacacggataggagacggcagg
agcagcaggccatccatcctggagaggaccctggacgatgtccccggtcctccagtgggc
atcctgttcccagaggtgaggaccggctcagtcaggctcatctggcagcctcctgcccag
cctaacggcatcattctggcctatcagatcacacacagacggaacacctccaatagcaac
gctgccactgtggacgtgctgagccccagtgcacgacagtatacagcatctggactgaaa
ccagagtccgtctatgtgttccgcctcaccgctcagacgcgcaagggctggggagaagct
gcagaggccctggtggtcacgacagagaagagagcgcggccccagccagccagctgtccc
acagtgccccaggaagacgtgcaggcgcgcagcgtgatgttgtcatgggaaccaggtagc
gacggcctgtcacctgtccgatactacacggtgcagtacagagagctaccagacagtaac
tggactgtccactctgcatcggtcaaccacgaggccagctcctacatagtggacagcctc
aagccgttcacctcctaccagttcagagtgaaagccaccaacgacatcggggacagtgag
tacagccaggagagtgaggctgtcaccacactgcaggacgccccagacaaagctcccaca
atcctctctgttacaccccacaccaccacgtcggtgctggtccgatgggagccgcctgct
gagaagctgataaacggggtgctgctggggttcagggtacgataccgggagttacaatac
gaccgcctccgtagcttcaccatacgaaccatcaacagccccgcctccaactgggctgag
ctcactgccccctacagtgtgaggaacctgagcgagtcctcgcttacccagtacgagctt
gataacttgagtaaacacaagcgttatgagatccgcctaagtgtgtacaacgccgtggga
gaggggcctaccagcacgccacaggaagtgttcgtaggagaggcagttccaacagccccg
ccccaatctgtgaccatccaatcatcaacagccacccagctggatgtcacatggagcccg
cctcctcttgactctcagaatggagacatacagggttacaagatctacttctgggagttc
cagctgcagaatgagacagagagactgcgtaccatgttcctcccagagctaggggtcaag
attaagaacctgactggctataccacatacatgatcagtgtagcagccttcaacgcagca
ggggacggaccccggagtcccccaaccaggggccgaacacaacaggctgcccccagcaga
cccagcttcctccacttcagtgagctgaccaccacgtcagtcaacatgtcgtggggagaa
ccaggccaggccaacggcatcatcgagggctaccgcctggtctacgagccctgcacacct
gttgatggtgttagtaagatagtcacagtggacgtgaagggcagcaccccactgtggatg
aagattaaggacctggctgacggggtgacctataacttcaggatccgggccaagaccctc
acctacgggccggaggtggaggctaacatcactaccggacctggagaaggagccccaggc
cctccaggtgaaccctttatctcccggtacggcacggccctcaccctacactggaccagt
ggagacccaggccgagctcccattacacgctacgtcattgaggccaggccctctgatgaa
ggactgtgggatatcctcatcaaagacattccaaaggaagtgacatcatacacactgaac
ctggacatgctgagagaaggggttacttatgacttccgggtcattggggtcaacgactac
ggctatggctcccccagtgctccttcaccctctatctctgcccagaaagtgtctcccttc
tatgaagagtggtggttcctggtggtcatcgctctggtgggcctaatcttcatcctcctc
ctcgtcttcatcctcatcatcaggggccagagtaagaagtacaccaagaaggctgactca
gtgtcctcttacccccacctagggagccacagtaacagcacctccctgcccctgtcccat
ggggagatggtcaggctggacgagggccgtttccccgccctggaactcaacaacagacgc
ctgtcagtcaagaactccttctgccgcaagaacggcatctacacacggtctcccccgagg
cccagtccaggcagtctacactactctgatgaagatgtcagtaccaagtataacgatctg
atccctgcagagaacagcagcctgactgagaagcactctgagatatcagactcacagggt
agcgacagcgagtacgaggtggatcagaaccgggacgggcaacagaagacacactccttc
gtcaaccactacatcagtgaccccacctactataactcctggcgccgccagcagaagggc
gtctctcgccccccggcctacggatatacacagccagagccgctgcacccccaacccctg
gctgagcaagatcccatccagcccaccaccaacaccaccccgagacaccctccacccctg
cccccactaccccccctgctgccccgggccctctctccatccccccagccccagggcctc
caggggctccgtagccaagggggtctcatccagggtctggcaccccagggccagggcaca
ctattcaggccgaagggcagccggactcccactccctcgctgctgtcctgttctgtgtct
gaaccccccagccagcacgggaccctcctgtacagcagtaggcctccaagcagcttgggc
tgttcctccacgcagcagcctcctaccgcgggcttctcctcttttgtttga
DBGET
integrated database retrieval system
