Oncorhynchus tshawytscha (Chinook salmon): 112238080
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Entry
112238080 CDS
T05605
Symbol
smad3b
Name
(RefSeq) mothers against decapentaplegic homolog 3b isoform X1
KO
K23605
mothers against decapentaplegic homolog 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04068
FoxO signaling pathway
otw04110
Cell cycle
otw04144
Endocytosis
otw04218
Cellular senescence
otw04310
Wnt signaling pathway
otw04350
TGF-beta signaling pathway
otw04371
Apelin signaling pathway
otw04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112238080 (smad3b)
04350 TGF-beta signaling pathway
112238080 (smad3b)
04371 Apelin signaling pathway
112238080 (smad3b)
04068 FoxO signaling pathway
112238080 (smad3b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112238080 (smad3b)
09143 Cell growth and death
04110 Cell cycle
112238080 (smad3b)
04218 Cellular senescence
112238080 (smad3b)
09144 Cellular community - eukaryotes
04520 Adherens junction
112238080 (smad3b)
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Gene cluster
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Motif
Pfam:
MH2
MH1
IRF-3
Motif
Other DBs
NCBI-GeneID:
112238080
NCBI-ProteinID:
XP_042168664
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Position
LG01:complement(3967739..4003451)
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AA seq
428 aa
AA seq
DB search
MSILPFTFPIVKRLLGWKKGEQINGQEEKWCEKAVKSLVKKLKKTGQLDELEKAITTQNI
NTKCITIPRSLDGRLQVSHRKGLPHVIYSRLWRWPDLQSPHELRAIELCEFAFHTKKDEV
CVNPYHYQRVETPILPPVLVPRHTEIPTDCPILDDYSHSIPENTIFPAGIEPQSNYIPET
PPPGYLSEDGEASDHHLNNLMNTGSPSNLSPESASPTHSTNLDLQPVTYCESAFWCSMSY
YELNQRVGETFHASQPSLTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLY
YIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKVPPGCNLKIFNNQEFAALLAQSVN
QGFEAVYQLTRMCTIRMSFVKGWGTEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSP
SIHCSSVS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtctatactgccattcactttcccgattgtgaagaggcttttaggctggaaaaagggc
gaacagataaatggacaagaggagaaatggtgtgaaaaggcagtgaaaagtctcgtaaag
aaattgaagaagacaggacagctggacgagttggagaaagccatcacgacccagaatatc
aacaccaaatgcattaccataccaaggtctctagatggtcgtctccaggtgtcccatcgc
aaaggccttccccatgtcatttactctcgtctgtggcgttggccagacctgcagtcgccc
cacgagctccgggccatagagctgtgtgagttcgccttccacaccaagaaggacgaggtg
tgtgtcaacccctaccattaccaacgcgtcgagacaccaatcctccctcctgtcctggtt
cctagacatacagaaatccctacagattgtcctattttagacgactacagccattctatc
cctgagaacaccatcttccccgccggcatcgagccacagagcaactacatcccagagacc
cctcctcctgggtatctgagtgaggatggagaggctagcgaccaccatcttaacaacctg
atgaacacaggctcacctagtaacctgtcaccagaatcagcctcaccaacacacagcact
aacctggacctacagccggtaacgtactgtgagtcagcgttctggtgctctatgtcctat
tatgagttgaaccagcgtgtgggcgagaccttccatgcctcccagccctctctcactgtc
gacgggtttacagacccctccaactcagaacgcttctgtctgggactactgtccaacgtc
aaccgcaacgctgctgtggagctcacacgcagacacataggccggggtgtgaggttgtac
tacatcggaggagaggtgtttgcagagtgtcttagtgacagtgccatctttgtccagagt
cccaactgtaatcaacgctatggctggcaccctgccactgtctgcaaggtccctccaggc
tgtaacctgaagatattcaataaccaggagtttgcagctctgctggcccagtcggtgaac
cagggctttgaggccgtctaccagctcaccaggatgtgtaccatacgcatgagcttcgtc
aagggctggggcaccgagtaccggcgacagaccgtaaccagcaccccttgttggattgag
ctgcacctcaatggccccctccagtggctggataaagtactgacacagatgggctccccc
agcatccactgttctagtgtctcctaa
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