Oncorhynchus tshawytscha (Chinook salmon): 112238091
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Entry
112238091 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin SEH1-like
KO
K14299
nucleoporin SEH1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03013
Nucleocytoplasmic transport
otw04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112238091
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
112238091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112238091
04131 Membrane trafficking [BR:
otw04131
]
112238091
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112238091
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
112238091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
112238091
NCBI-ProteinID:
XP_042173950
LinkDB
All DBs
Position
Unknown
AA seq
384 aa
AA seq
DB search
MFVARSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKSESGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVK
FAPKHMGLMLTTCSADGVVRVYEAPDVMNLSQWSLQHEISCKLNCSCISWNPSSSRAHPP
MIAVGSDDSNVMYGGKVQIYEYNENTRSYMKTQTLMTVTDAVHDIAFSPNLGRSFHVLAI
ATKDVRIFKLVPLRKESSSTGPTKFEVQIVAQFDNHNSQVWRVSWNITSTLLASSGDDGC
VRLWKANYMDNWKCTGILKGDGSPVNGSSGQPGAMNTMVGSTVQTSQNALNGSAAGRYFF
XPLDAPRAGSRYGHLLPPFSDRAL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggctcgtagcattgcagcagatcacaaagatctaatccacgatgtttcctac
gattttcacggccggagaatggcaacgtgttcaagtgaccaaagtgtcaaggtttgggac
aagagtgaaagtggggagtggcactgcactgccagctggaagacacacagcgggtcagta
tggagggtgacatgggcccaccctgagtttggacaggtgctggcctcctgctcctttgac
cgaacagccgctgtgtgggaggagatagttggggagtctaatgacaaacagagggggcag
agccactggataaagaggacgactctggtggacagcaggacgtcggtgacggacgtgaag
tttgctccgaaacacatgggtctgatgctgaccacgtgctcagcagacggggtggtgagg
gtctacgaggctccagacgtgatgaacctcagccagtggtccctgcagcatgagatctcc
tgtaaactcaactgctcctgtatctcctggaacccctccagttctcgcgcccaccctccc
atgatagcagtgggaagtgatgacagcaacgtgatgtacggtgggaaggttcagatctac
gagtacaatgaaaacactaggtcatatatgaaaacacagacattgatgacggtgactgat
gcggtgcacgacatagccttctcccctaacctggggcggtccttccacgtgctcgccata
gcaaccaaagatgttcggatctttaagttggtacctttgcgtaaggagagcagctcaaca
ggccctactaaatttgaggttcagatcgtggcccagttcgacaaccacaactcccaggtg
tggagagtctcctggaacatcactagcaccttgctggcctcctcaggagacgacggctgt
gtccgactctggaaagctaactatatggacaactggaagtgtacaggcatcctgaaggga
gacggaagtccagtcaacgggtcgtcaggacaacccggtgccatgaatactatggtgggg
tccactgtccagacctcccagaatgcactgaacggctctgctgcaggaaggtatttcttc
ncccctctggatgcccccagggcagggtccaggtacggccacctgctgccccccttctct
gatagagcactctga
DBGET
integrated database retrieval system
