Oncorhynchus tshawytscha (Chinook salmon): 112238140
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Entry
112238140 CDS
T05605
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112238140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112238140
03110 Chaperones and folding catalysts [BR:
otw03110
]
112238140
03029 Mitochondrial biogenesis [BR:
otw03029
]
112238140
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112238140
Enzymes [BR:
otw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
112238140
Messenger RNA biogenesis [BR:
otw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
112238140
Chaperones and folding catalysts [BR:
otw03110
]
Heat shock proteins
HSP60 / Chaperonin
112238140
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
112238140
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112238140
Exosomal proteins of other body fluids (saliva and urine)
112238140
Exosomal proteins of breast cancer cells
112238140
Exosomal proteins of colorectal cancer cells
112238140
Exosomal proteins of bladder cancer cells
112238140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Gag_p15
AcnX_swivel_put
Motif
Other DBs
NCBI-GeneID:
112238140
NCBI-ProteinID:
XP_024262499
LinkDB
All DBs
Position
LG03:50367792..50375880
Genome browser
AA seq
576 aa
AA seq
DB search
MLRLPTVMRQMRPVSRALAPHLTRAYAKDVKFGADARAMMLKGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKCKYQNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDSISKGANPVEIRRGVMLAVETVINELKRMSKPVTTPEEIAQVATISANGDV
EIGTIISNAMKKVGRKGVITVKDGKTLYDELEIIEGLKFDRGYISPYFINTAKGQKCEFQ
DAYVLLSEKKISSVQSIVPALELANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKAQLHDMAVATGGTVFGDEAVGIALEDIQAHDFGKVGEVSVTKDDTMLLKG
KGDTAAIEKRQAEIVEQLENTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRSIPALDALVPINTDQKIGIDIIRRALRVPAMTIA
KNAGVEGSLVVEKILQAAGEIGYDAMEGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAECVVTELPKDEKEAGMPGGMGGMGGMGGMGGGMF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtctacccacagtgatgagacagatgaggccagtcagcagggccctggccccc
cacctcacccgggcttacgccaaggacgtcaagtttggagccgatgctcgggccatgatg
ctgaagggagtggatctgctggctgatgctgtcgctgtcaccatgggacccaagggtcgc
acagtcattatcgagcagagctggggcagccccaaggtgaccaaagacggcgtcactgta
gccaaggccatcgacctgaagtgcaagtaccagaacattggtgccaagctggtccaggac
gtggccaacaacacaaacgaggaagcgggagatggcaccaccactgccaccgtgctggcc
agagccatcgccaaggagggctttgacagcatcagtaaaggagctaaccctgtggagatc
cgccgtggcgtcatgctggctgtggagaccgtcatcaatgagctgaagaggatgtccaag
ccagtcaccacccctgaggagattgcccaggtggccaccatctctgctaatggagacgta
gagatcggcaccatcatctccaacgccatgaagaaagtgggccgcaagggagtcatcact
gtcaaggatggcaaaaccctttatgatgagcttgagatcattgaggggctgaagttcgac
cgcggatacatctccccttacttcatcaacacagccaaaggccagaagtgtgagttccag
gacgcctatgtgttgctgagtgagaagaaaatctcttctgtccagagcatcgtccctgcc
ctggaattggccaatcagcaccgcaaacctctggtcatcgtggccgaggatgtggacgga
gaggccctcagcaccctggtcctcaacaggctgaaggtgggactgcaagtggtggcagtc
aaggccccaggctttggagacaacaggaaggcccagctgcatgacatggctgttgccacc
gggggcactgtgtttggtgatgaggcggtgggcattgctctggaggacatccaggcccat
gactttggtaaggttggcgaggtgtctgtcaccaaggacgacaccatgctgctgaagggg
aagggagacactgcggccatcgagaagcgccaggcagaaatcgttgagcagctggagaac
accactagcgactatgagaaggagaagctcaacgagaggctggccaagctgtctgacgga
gtggctgtgctcaaggtaggaggaacgagtgatgtggaggtgaatgagaagaaggaccgt
gtgactgatgccctgaatgccaccagggccgctgtggaggagggcattgtgcccggaggt
ggctgtgccctgctgcgctccatccctgccctggatgccctcgtgcccattaacactgac
cagaagattggaattgacatcatcagacgagccctgcgtgtgccagccatgaccattgcg
aagaacgctggtgtggagggctctctagtggtggagaagatccttcaggccgcgggggag
ataggatacgatgccatggagggagagtacgtcaacatggtagagaagggcatcatcgac
cccaccaaggtggtaagaacggcactgatggacgctgcaggtgtggcttctctgctctcc
accgccgagtgtgtggtcacagaactgcccaaggatgaaaaggaggctggcatgccaggg
ggcatgggtggtatgggaggtatggggggcatgggaggtggcatgttctaa
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