Oncorhynchus tshawytscha (Chinook salmon): 112238151
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Entry
112238151 CDS
T05605
Name
(RefSeq) cingulin isoform X1
KO
K06102
cingulin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112238151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_tail_1
Laminin_II
CALCOCO1
Motif
Other DBs
NCBI-GeneID:
112238151
NCBI-ProteinID:
XP_042175295
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MAHPNPQSLPYPTHPHPQSLPYPAQPHPQTPVNRLISRFDGSSSTREQQRGRSPVAEDPR
DTINSSHAPNPYSSSSPSLTPNPYSSPSPSLTPNPYSSPPSSTHSSLGWGQGSVSKTTPH
PVNQRALPGRFVAVEMPSANQTDSLVTPDLLLQSSEVTSEEEQVMQTIYSVLREGTSESD
SVIRHKVRVIFQKIQGLKSSESSGEEWKREKRDLERKMMELQTSLQEERRGSVGSSDPVL
KAELDSCLDENMQLQETVDRKKTELHQTHSELSQLRMERESAESRVREMEDRLGELQEEL
RTENGNKTDLVTCQASLLEVSMLKQKLEDSLRQRERELTALKGALKDEVATHDKDMETLR
EQYSTDMERLRSTVEQVSQSQAGIESERLRVNASVRTLQQQLEDCRDESGHWMTQFHNTR
DELRTTKQEMLQARLEKEELEEELNEVQERVNTMKQQIPDPSHTHTLNQELQSLRADLQQ
AQSEAEKKRAELDKKVMEVISLKKANQEQEAELKYEMDRLRGQSNRAKEDLAKAQERTKQ
LPDPSVVSGLQSELTDARGERDRLREKLSSTEQELQSNTERLARTQTELNALRDSQQEQE
AANTRLREKLSRLESQLASSASESSEAELSLQAELRGLRQDLDEARRETSRLGQDHRQLS
LRLEDREKERDQLTQTNTQLEEQRRQQERSLDKLNKEFESLSQSSGEEVQVLRAQLEEQR
ERSRRETQEAQRQGNDTLVELERSQTSHKMLEEEASRQKKELLSVVEERDNVQLDKELLT
NRLHHLEAELENSRSSLTDKSRELRSTEDKMKRLELELEEEKGSVELLTDRVTRTRDQME
QLRSELMQERSSRQDLELDKNALERHLKELKTRVSDMEGQSRSSVGVAQLESKVHELEER
LHSEDREKNSMLSSQRRLEKKLKELNFTLEEERHQHTEQRDQLSLRVKALKRQVDEGETE
VERMEGLRRKSQREMEEQMELKEALQGRVTALETELKRKVQQAQRQALDSSALSSDEDDE
GLYNPSSITSILTGSNLHTSSC
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcacaccccaacccccagagccttccttacccaacacacccccaccctcagagcctt
ccttacccagcacagccccacccccagacccccgtcaacagactgatcagcaggtttgac
ggcagcagcagtaccagagaacaacagagggggcgctctcctgtagcagaggaccctaga
gacaccatcaactcttcccatgcccccaacccctactcctcctcttcaccatctctcacc
cccaacccctactcctctccttcaccctctctcacccccaacccctactcctcccctccc
tcctccactcacagcagcctggggtggggccaaggctccgttagcaagacaacgccccac
ccagtcaatcagcgggctctgccggggaggtttgtcgctgtggagatgccgtcagccaat
cagacagactcgctggtgacccctgaccttctgcttcagagttcagaggtcaccagtgag
gaggagcaggtcatgcagaccatctacagtgtcctcagagaagggaccagtgagagtgac
tcagtcatcagacacaaagtcagggtgatcttccagaagatccagggactcaagtccagt
gagagttctggtgaggagtggaagagagaaaagagggatctggagaggaagatgatggag
ctacagacctctctacaggaggagaggaggggctctgtgggcagctctgaccctgtgtta
aaggcagagctggattcatgtctggatgagaacatgcagctccaggagactgtggacagg
aagaagactgaactacaccagacacactctgagctgagtcagttgcgtatggagagagag
agtgctgagtccagagtcagagagatggaggaccgactgggcgagctacaggaggagctg
aggacagagaacggcaacaagacggacctggtgacgtgtcaagcgtctctgttggaggtg
tccatgttgaagcagaagctggaggattctctgagacagagagagagggagctgacggcc
ctgaagggagctctgaaggacgaggtggccacgcacgacaaagacatggagacacttcga
gaacagtacagcactgacatggagagactgaggagtacagtggagcaggtctcacagtct
caggcgggtatcgagtcagagcggttgcgtgtgaatgcgtcggtgcgtactctacagcag
cagctggaagactgcagggacgagagtggccactggatgacgcagttccacaatactaga
gatgaactacggaccaccaaacaggagatgctgcaggctcgtctggagaaagaggagctt
gaggaagaactgaatgaagtacaggagagggtcaacaccatgaaacagcagataccagac
cccagtcatacacacacactcaaccaggagctgcagagtttgcgtgccgatctgcagcag
gcccaatcagaggcagagaagaaaagggcagagctcgataaaaaggttatggaggtaatc
tccctgaagaaggccaaccaggagcaggaggcggagctcaagtatgagatggacaggctg
aggggccaatcaaatcgagccaaagaggatctggccaaggcccaggagagaaccaaacag
ctccctgacccgtcggtcgtgtctggcctgcagtcagagttgactgatgctcgtggggag
agagaccgactgagagagaaactctccagcactgagcaggagctgcagtcaaacacagag
cggctggccagaacccagacagaactaaacgctctcagagactcacagcaggagcaggag
gcagctaacacacgcctccgagagaaactctcacgcctggagtctcagctggcttccagt
gcatcagagagttcggaggcagagctgtccctccaggcggagttgagggggttgaggcag
gatcttgacgaggccaggagagaaacctctcggctgggtcaggaccaccggcagctcagt
ctgcgtctggaggacagggagaaggagagggaccagctcacacagaccaacacacagctg
gaggaacagaggagacagcaggagcggtccctggacaaactcaataaggagtttgagtct
ctgtcccagtcgtctggtgaggaggtgcaggttctcagggcccagctggaggaacagaga
gagagatctcgcagggagacacaggaggcccagaggcagggcaatgacacactggtagaa
ctggagaggagccagacttcccacaagatgctggaggaggaggcgtcccgtcagaagaag
gagctgctctctgtggttgaggagcgagacaatgttcaactggacaaggagctgctcacc
aaccgcctgcaccacctagaggctgaactggagaacagcaggagcagcctcacagacaag
agcagggagctccgcagcacggaggacaagatgaaacgactggagctggagctggaggag
gagaagggatctgtggagctactcactgacagagtcaccaggaccagagaccagatggag
cagctgcgttcagagctgatgcaggagagatcctccagacaggacctggagctggacaag
aatgccctagaaagacatttgaaggagttgaagaccagagtatctgatatggagggtcag
tctcgctcctctgtaggagtggctcagctggagagtaaagttcacgagttggaggaacgc
ctccacagcgaggatagggagaagaactccatgttgtcgtctcagcgtcgcctggagaag
aaactgaaggagctcaactttaccctggaggaagagagacaccaacacacagaacagaga
gaccagctgtctctgcgtgtgaaggctctgaagagacaggtggatgagggggagaccgag
gtagagaggatggagggattgaggaggaagtcccagagagagatggaggaacagatggaa
ctaaaggaggccttacagggcagagtcaccgcgctggagactgagctcaagaggaaggtg
cagcaggcgcagcgtcaggccctggactcgtcggctctgagctctgacgaagatgatgaa
ggcctgtacaacccctccagcatcacgtccatcctcactgggagcaaccttcacaccagc
tcctgctag
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integrated database retrieval system
