Oncorhynchus tshawytscha (Chinook salmon): 112238193
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Entry
112238193 CDS
T05605
Name
(RefSeq) transcription elongation factor A protein 2-like
KO
K03145
transcription elongation factor S-II
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112238193
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
112238193
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
DBD_Tnp_Mut
TetR_C_5
Motif
Other DBs
NCBI-GeneID:
112238193
NCBI-ProteinID:
XP_042155745
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Position
LG16:84123045..84165034
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AA seq
309 aa
AA seq
DB search
MAKDHEVERIAKKLDKMVHKKNTDGAIYLLRELKIINMSLETLQSTRIGMSVNAVRKQSS
EEEVQTLAKSLIKSWKKLLDGSEGKAVEEKRREGSPLRSSSSKDSPGSSDRSKKQELPEP
PKTPTTPTTPTTLKFTSFPPTPVTTDSVRTKCRELLVAALQTDDDYKPIGADTDNLAAQI
EDCIYQEFKSTDQKYKSRLRSRISNLKDQKNPDLRRNVLAGNISADRIASMAAEEMASAE
LKEMRKTLTKDAIREHQLSKVGGTETDMFQCGKCRGKNCTYTQVQTRSADEPMTTFVLCN
GCGNRWKFC
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagaccacgaggtcgaacgcattgctaaaaagctggacaaaatggtgcacaag
aaaaacacggacggtgccatatatctgctgagggagttgaagatcattaacatgtctctg
gagactctacagtccaccaggatcggtatgtcggtgaacgctgtgaggaagcagagttca
gaggaagaggtccagaccctggccaagtcactcatcaagtcctggaagaaactactggac
ggttctgaggggaaggctgtggaggagaagaggagggagggctctcctctgaggtcatct
tcgtccaaggacagtcctggatccagcgaccgcagtaagaaacaagaactacctgagccc
ccgaagactcccaccacacctacaacccccaccaccctaaagttcacctccttccctccc
actcccgtcaccactgacagcgtacgcaccaagtgccgagagctgctggtggctgccctg
cagaccgacgatgactacaagcccattggagcagacactgacaatttggctgctcagatt
gaggactgtatctaccaggagtttaagtctacagaccagaagtacaagtccagactgagg
agccgtatctccaacctgaaggaccagaagaacccagacctccgacgcaacgtcctcgct
ggaaacatctcagctgatcgtatcgctagcatggctgctgaggagatggcgagcgcggag
ctgaaagagatgaggaagacgttgaccaaggacgccatcagagagcaccagctgtctaaa
gtgggcgggaccgagacggacatgtttcaatgtggcaaatgcaggggcaagaactgcacc
tacacacaggtgcagacgcgcagtgctgacgaacccatgactacattcgtactgtgtaac
ggctgtggcaatcgctggaagttctgttga
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