Oncorhynchus tshawytscha (Chinook salmon): 112238210
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Entry
112238210 CDS
T05605
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112238210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112238210
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
Others
112238210
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RUBC_PIKBD
RH_dom
RUN
CMD
Motif
Other DBs
NCBI-GeneID:
112238210
NCBI-ProteinID:
XP_042178838
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All DBs
Position
LG06:complement(8550772..8621724)
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AA seq
1285 aa
AA seq
DB search
MEITSEEKAEERRREHWKLLSSLKTTVEGLVSSSNPNVWSRYGGLQRLHKDMNHILSHGL
KHEQVYYKQKDYWPFVWRVRSVSPHLASHVEQFSKLEPVLSSGLKSVGEGYKAERWLLHS
LQVHLLSAQLRPLLKHQGHTSKYYNVEAFLLSEPHVTAMFQCLEAVEQNNPRLLALVNTV
KLSTLMCSPYMEGLLKSQSLGVLPGGGWRSGEGQGPPRGELNHRLTTSQCSLLHRDGGLT
PNRNNTGAISESNSDSTPAARASGAPWGCVGGPEGDGERGMSPPPGPSVVVPSIALTEPA
SPCPAHSDAVDSGEGDYDDGPEYLAIGNLGHRSNRRDSQSSTPGGDPCGGESDGEIQVQS
PGRSSLASVPPPTPRRSSFSEGQREPGRGGSRGHVRSMSDTGINSKHRHGEHVCAAESLV
AEDCRLEDYSPFSLGSSDGSTPSSLYMESNGSQYSSVPDCMFRKPLEGQSLISYLSEQDF
GSCADLEKENAHFSISESLIAAIELMKCNLRRRVVVEDEEEGDDSDSEIRQLKQKIRLRR
RQIQRTRLPPSQRLFHSTDSGCSRRSSQDSFHLSNSGSAEEVEECELKDGCEGQSLMAVS
KSVSLSHASLFSDADIKRGVTSSGRSFLRSESISPSFLQSNSAESVAMGLLRQFEGMQLP
AASELDWLVPEQDAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAPPRPQIIFN
IHPAPKRKIVVAKQNYRCAGCGTRIDPDYIKRMRYCEYLGRYFCQCCHENAQAVVPGRVL
RKWDFSKYYVSNFARDLLGKISGDPLFNPNDINNGLYKKTKALETVRVLRVQLFHMKNLF
KTCRLARDVLDQFDSLPGHLTEDLHLFSLSDLNAVRNGELAPRLRELLKLGSAHVAGCVL
CQAKGFVCEFCGNDKDIIFPFQLNKCTCCEGEPPLLVGGLGVPRAPSPFLSPSWRNWKFR
RLARALSQDKRAGEGGEEEGEEESEAREDEEKWTGEREKERRRTEGETRRLFTAFQHGTL
AKAFWSKGKEEDEENLEGGQEGEWEGETQTGKGMEEEAKFETEEVENKEREEDSEGSAEG
HVKKKQGNLFKALGVSKLTNTFSKDKGSREREKEKQGDVDGTEKEERRGLWRVPGVGRLA
KVFSKGEVERKKEKGELEELDKCDSKGKFFKKDCSDKGESEVQESNSSVVVEGKDGWFTV
KPPVLGLRLLNVFSRDTRKKEGRMMSDEKERMEEQETPSNWRSCKTRKARRVTIGRGERE
KNRGERAVETEEEEEERSRGGGTEQ
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggagattacttcggaggaaaaagccgaggaacgcaggagggaacactggaagctgttg
tctagtctgaagaccacggtggagggcctggtgtccagcagcaaccccaacgtgtggtct
cgctatgggggtctgcagcggctgcacaaggacatgaaccacatcctcagccacggcctc
aagcacgagcaggtgtactacaagcagaaagactactggccctttgtgtggcgtgtccgc
tccgtcagccctcacctggcctctcatgtagaacagtttagtaagctggagcctgtgctg
agcagtgggttgaagagtgttggggagggttacaaggcagagcgctggctgctgcacagc
ctacaggtccacctgctgtcagcccagctccgacccctgctcaaacaccagggacacacg
agcaagtactacaatgtggaggcctttctgctgagtgagccccatgtgacggccatgttc
cagtgtctggaggccgtggagcaaaacaacccccgtctgctggcccttgtcaacacagtt
aagctgtctactctaatgtgctctccgtacatggagggcctgttgaagagtcagagtctg
ggtgttctgccggggggcggctggaggtccggggaaggtcagggtccccccagaggggag
ctcaaccacaggctcaccacctcccagtgctccctcctccaccgagacggaggactcacg
cccaaccgtaataacacaggggccatctcagagagcaactcagactccactccagccgct
agggcctcgggagccccctgggggtgtgtgggggggcccgagggagatggggaaaggggc
atgagcccccctcccggtccctcagtggtggtcccctccatcgccttgacagagcccgcc
tccccatgccctgcccactccgacgccgtagactctggcgagggcgactacgacgacggc
cccgagtatctggctatcggtaacctggggcatcgtagcaatcgccgcgactcccaaagc
tccacccccggtggcgatccttgcggcggcgaatcggatggtgagattcaggtccagtcc
cctggaaggagctccttggcttcggtcccacctcccacacctcgaaggtcatccttttca
gagggtcagagagagccgggtcgggggggcagcagagggcatgtccgctcaatgtccgac
acagggatcaacagcaaacatagacatggtgagcatgtgtgtgcagcagaatcattggtt
gcggaggactgtcgtttggaggactacagccctttctcccttggcagcagtgatggcagt
acacccagttccctctatatggagtctaacggctcccagtacagcagtgttccagactgc
atgttccggaagccgttggagggacagagcctcatcagctacctgtcagagcaggacttc
ggcagctgtgctgacctggagaaggagaacgcccacttcagcatctcggagtctctgatc
gccgccatcgagctgatgaagtgcaacctgcggcggcgggtggtggtggaggacgaggag
gagggtgacgacagtgactcagagatccggcagctcaaacagaagatccggctgcgtaga
cgccagatccagcggacccgcctgcctccctcacagcgcttgttccattcaacagacagt
ggatgctcccgcaggagctcccaggattcctttcacctgtccaactccggctcggccgag
gaggtggaggagtgcgagctgaaagatggctgtgagggccagtccctgatggcggtgtct
aagagtgtctccctgtcgcacgcctccctcttctcagatgcagacataaagcgcggtgtg
acatccagtggccgctctttcctcagatcagagtctatttctccgtcgttcctccagtct
aactctgctgagtcggtggccatgggcctgctcaggcagtttgagggcatgcagctccct
gcagcctcggagctcgactggctggtcccagaacaagacgcaccacagaagctcctgccc
atccctgactccctgcccatctctcctgatgacggggagcatgctgatatctacaagctg
aggatccgagtgagagggaacctggagtgggccccgccgcgaccccagatcatcttcaac
attcaccccgcgcccaagaggaagatcgtcgtggccaagcagaactaccgctgtgcaggc
tgcgggactcgcatagacccagactacatcaagcgaatgcgctattgtgagtacctgggc
cgctacttctgccagtgttgccatgagaacgcccaggcggtggtgccgggccgtgtgctg
aggaagtgggacttcagcaagtactatgtcagcaactttgcccgggacctgctgggcaag
atatcaggagaccccctgttcaaccccaacgacatcaacaatggcctctacaagaaaacc
aaagccctggagactgtccgggttttgagggtccaactattccacatgaaaaacctcttc
aagacctgccgcctagctagagacgtgctggaccagttcgacagcctccctggtcacctg
actgaggacctgcacctgttctccctcagcgacctcaacgctgtgcgcaacggagagctg
gccccccggctacgagagcttctgaaattgggttccgcgcacgtggctggctgtgtgctg
tgtcaggccaagggctttgtgtgtgagttctgcggcaacgacaaagacatcatcttcccc
ttccagttgaacaagtgcacgtgctgcgaaggtgagccccccctgctggtgggaggactg
ggagtcccacgggccccctctcccttcctctccccctcctggagaaattggaagttccgc
aggctggccagggccctgtcccaagacaagcgagcgggagagggaggagaggaagagggg
gaggaagagagtgaggcaagggaagatgaggagaaatggactggagagagagaaaaggag
aggaggagaacagaaggggagacgaggaggttattcacagcgttccaacatggaactctg
gccaaggccttttggagtaaaggaaaggaggaagatgaggagaatctagaaggagggcaa
gaaggagagtgggaaggagaaacccagacagggaaaggaatggaggaggaagcaaagttt
gaaactgaggaggttgagaacaaagaaagggaggaagacagtgagggaagtgcagaagga
cacgtgaagaaaaagcagggcaatttatttaaggccctcggtgtcagcaaactaaccaac
actttctccaaggacaaaggatccagggaaagagagaaagaaaaacaaggggatgtggat
gggacagagaaggaagagaggagaggactctggagagtcccaggggttgggaggctagcg
aaagtgttctcaaaaggggaagtagagaggaaaaaggagaaaggagagctagaggaatta
gacaagtgtgacagtaaagggaaattctttaaaaaagattgttcagacaaaggagaaagt
gaagtacaagagagcaacagcagcgtagtagtggaaggaaaggacggatggttcaccgtg
aaacctccggttttgggccttaggttgctcaacgttttctccagagacaccagaaagaaa
gaagggaggatgatgagtgatgaaaaagagagaatggaagagcaggagaccccatctaac
tggagatcctgcaaaacacgcaaagccaggagggtaacaatcggtaggggagagagagaa
aagaaccggggtgagagggcggtggagacagaggaggaggaggaggagagaagtagaggg
ggaggaacagagcaatag
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