Oncorhynchus tshawytscha (Chinook salmon): 112238241
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Entry
112238241 CDS
T05605
Symbol
pacs2
Name
(RefSeq) phosphofurin acidic cluster sorting protein 2 isoform X1
KO
K23294
phosphofurin acidic cluster sorting protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112238241 (pacs2)
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
ER-mitochondria tethering complex
112238241 (pacs2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pacs-1
Motif
Other DBs
NCBI-GeneID:
112238241
NCBI-ProteinID:
XP_042186238
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All DBs
Position
LG11:51769431..51908356
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AA seq
897 aa
AA seq
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MAERSGRLSFGGGALNRPVPMNLFATWEIDGSSPSCIPRLCSLTLKRLVVLRELDKELIS
VVIAVKIQGSKRILRSHEIVLPPSGSVETDLALTFSLQYPHFLKREGNKLQILLQRRKRY
KNRTILGYKTLAVGTIDMAEVMQHPTEGGQVLSLCSNQKEMLGKVAEIWIFSLSSQPIDH
EEAALQEGTKIKCSDTYSEEEYESFSSEQEASDDAVQGQDLEDDEYDVRKPKKHRRSIVR
TASITRQQNFKQRLVALIKRFRVSDEVLDSEQDPAEPPPEVEEDLDLESLDLENPSDSGP
ELDDDDSVLSTPKPKLKPYFEGLSLSSSQTDIGSIHSSRSHREPPSPMDPDKTKSSGDKF
QVDNVSDNASLQEEQPEAVTPTTELEMDNMDTFLEKLPPTGKMKKTESLIIPSNRWQEAK
LAGRRGRSTSLKERQPNRPQNERANSLDNERLLDTRCHLQCIPPPQIPRKTVYDQLNHIL
VSDHHLPDSIILINTSDWQGQYLSSVLQNQHLPVVCTCTTADIQAAFNTIVSRIQRFCNC
NSQTPIPIKIAVAGAQHYLGAVLRLFVDHLSYKTPDWLGYMRFLIIPLGSHPVSKYLGTI
DYRYNSLFQDTAWSDLFHKPEAPVMVQESPDVVSRVTQYMVGANGAHQLPIAEAMLTYKQ
KRKKSFHFDFAVSPDEDSCQKFIPFIGMVKVGIVEPSSATSGDSDDASPMGMVFHSSTPP
QVSPALKEASPTPPSSPSVNTSFSSYSSPQGELMGLQVDYWVAPSPADRKRDVEKRDSSS
SKNTLKCTFRSLQVSRLPQAGAQPQPAMSMTVVMKEKNKKVMFLPKKTKDKDVESKSQVI
DGISRLICTAKHQQTMLRVLIDGVEWNDVKFFQLAAQWSSHVKHFPIGIFGHTKGPY
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagaagtggccggttgagcttcggtggcggggcgctcaacagaccggtgcca
atgaacctgttcgctacatgggaaatagatggatcgtccccgagttgtatcccgaggttg
tgcagtctgactctgaagaggttggtggtcctgagggagctggataaggagctcatctct
gtggtcatcgctgtcaaaatccagggttccaagaggatcctgaggtcccatgagatagtg
ctgccccctagtggctcagtggagactgacttggctctcaccttctcactgcagtaccct
cacttcctgaagagagaaggtaacaagctccagatcctgctgcagaggaggaagagatac
aagaacaggactatcctgggatacaagaccctggctgtaggaaccatcgatatggctgag
gtgatgcagcaccctacggaggggggccaggttctgtctctgtgcagtaaccagaaggag
atgctgggtaaagtagctgagatctggatcttctcactgtccagtcagccgatagaccac
gaagaggccgctctgcaggagggaaccaagatcaaatgctcagatacctattcagaggag
gagtatgagagtttctcttcagagcaggaggccagcgatgatgctgttcagggtcaggac
cttgaggatgatgagtatgatgtaaggaaaccaaagaagcacaggaggtctatcgtgagg
actgcctcaattaccaggcagcagaactttaaacagagactggtggccctgatcaagagg
ttccgagtctcagacgaggtgttggactcggagcaggacccggcagaaccccctccagag
gtagaggaggatctagacctagagagtctggacctagagaaccccagtgacagtggaccg
gaactagacgatgacgacagtgtcctcagcaccccgaaacctaaactcaagccatatttt
gagggtctctccctctccagttctcagacagatattggcagcatccacagcagccggagt
cacagagagccaccaagtccgatggacccagacaagactaagagcagtggagacaagttc
caggtggacaatgtctcagataacgcttctcttcaggaggagcaaccagaggcagtgacc
cccactacagagctggagatggacaacatggacaccttcctggagaaactgccccctact
ggcaagatgaagaagaccgagtccctcatcatcccttccaacaggtggcaggaagctaaa
ttggcagggaggagagggagaagtacttccctaaaggagcgccagcccaacagaccacag
aatgagagagccaacagcctggataacgaacgcttgcttgacacacgctgccatctacag
tgtattccccctccacagatccccaggaagactgtgtatgaccagctgaaccacatcctg
gtgtctgaccaccatctacccgacagcatcatcctcatcaacacatctgattggcagggc
cagtatctgtcaagtgttctccagaaccagcacctcccagtggtgtgtacctgtactaca
gcagacatccaggccgccttcaacaccatcgtctcacgcatacagagattctgtaactgt
aacagccagacgcccatccccataaagatagctgtggctggagcccagcactacctcggt
gcagtcctcaggctgtttgtagaccacctctcttacaagacccctgattggctgggctac
atgaggttcctcatcataccactaggatctcacccagtctccaagtacctgggtaccatc
gactatcgatacaacagtttattccaggacactgcgtggagtgacctgtttcacaagcca
gaagcaccagtcatggtgcaggagagtccagacgtggtttccagggtaacccagtatatg
gtcggggccaacggagctcaccaactccccatcgctgaggccatgctcacatacaaacag
aagaggaaaaagagctttcattttgattttgcagtaagccccgatgaggactcgtgtcag
aagttcattccctttatcggaatggtgaaagttggcatcgtggagccgtcatctgcaaca
tcaggtgactctgacgatgcatcccccatggggatggttttccactcctccacccctcct
caggtgtcccctgccctgaaggaagcctcacccacccctccctcctccccctccgtcaac
acaagcttcagttcctacagttctccccagggggagctgatgggactacaggtggactac
tgggtggctccctccccggctgacaggaaaagagacgtggagaaaagggactcgtcctcc
tccaagaacactctgaagtgtacgttccgctcgctgcaggtcagcaggctcccccaggcc
ggggcccagccacagcccgccatgtccatgactgtcgtcatgaaggagaagaacaagaaa
gtcatgttcctgccaaagaagactaaagacaaggatgtggagtctaagagccaggtgatc
gatggcatcagtcgactgatctgcactgccaagcaccagcagaccatgctgagggtgctg
attgacggcgtggagtggaatgatgtcaagtttttccagttggcggcacagtggtcgtca
cacgtcaaacatttccccatcgggatctttggacacactaaagggccttactag
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