Oncorhynchus tshawytscha (Chinook salmon): 112238242
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Entry
112238242 CDS
T05605
Symbol
dcaf5
Name
(RefSeq) DDB1- and CUL4-associated factor 5
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112238242 (dcaf5)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112238242 (dcaf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
WD40_Gbeta
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
112238242
NCBI-ProteinID:
XP_042186249
LinkDB
All DBs
Position
LG11:51912472..51937424
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AA seq
863 aa
AA seq
DB search
MRNRKLARLTAPGKMKEVKGCGMRSSVGFLSQRRLFGNPLMKEEFQRLRLAGCTSLYKKD
MLGHFGCVNAIEFSNNGGEYLVSGGDDRRVLLWNMERALHARSAKPLKLKGEHLSNIFCL
AFDSTNKRVFSGGNDEQVILHDVERGETLNVFLHDDAVYGLSVSPVNDNVFASSSDDGRV
LIWDTRERPHGEPFCLANYPSAFHSVMFNPAEPRLLATANSKEGVGLWDIRKPRTSLLRY
GGSMSLQSAMSVRFNSAGTQLLALRRRLPPVLYELHSRLPSFQFDNQGYFNSCTMKSCCF
AGDEDQYILSGSDDFNLYMWRIPKDPEAGGPGRVVNGASMVLKGHRSIVNQVRFNPSTYM
ICSSGVEKVIKAWSPYQQTESLGDLDSLVEDKSRSLYSHEEYINLVLNSGSGLSHDYVSQ
SIQEDPRMMAFFDSLVRREIEGWSSDSDSDLSEGAILQLHARGRRSTRSIRDGAGVLVGS
GVATPVPPSAAATADSDHSSSSSLAAPEASGAEHPEGVEPLQPRRRGSRYQQSVFLLDLV
GEDSDSSGFWPDPMPRPRSPSPRDNSTLSSPTSSPAGASSSSSSSTSSTSSEDEEQRRAS
RRQRTAARWRRMHFPRLSSGGRPESAQALYPGGVDSCSYPKISIDEASSSSASSTELQQD
QDSVQIGPHRSGSKTGRRKSHTLPGSSPAVSLDSQDDRAEQEGLLIASLLSQDALQQRNE
SRAGRVGERRAALERMAEGLDSPEEADESDHSRWISPSSRHHSPGLNGLQHLDMTEVPVG
CRGRLAPDLFESSDSEGERETLELKSAGTRTLVEEEEGEEGGSSSSQRGPSQGALKRTHL
GSRGQGSGEGSGGSETSEKKLKT
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatcgcaagctggctaggctaactgctccaggaaaaatgaaggaggtgaagggt
tgcggtatgcggtcctccgtgggctttctgtcccagagaaggctcttcggtaacccgctg
atgaaggaagaatttcagagactccggttggcaggatgcacgagcctttacaagaaagat
atgctgggacatttcgggtgtgtcaacgccatcgagttttccaacaatggaggagaatac
cttgtgtccggaggggatgaccgcagggtgttactatggaacatggagagagctcttcat
gcccgctcagccaagcctctcaaactgaagggagaacacctctccaacattttctgtctg
gcattcgacagcaccaacaaaagggtgttttctgggggcaacgatgaacaggtcatcctt
catgatgtagaacgaggcgagactctgaacgtgttccttcacgacgatgcggtgtacggc
ctgtcagtcagccccgtcaacgacaacgtgttcgccagctcctcggacgacggacgggtc
ctcatctgggacacacgggagcggccgcacggagagcccttctgtctggccaactaccca
tcagccttccacagtgtgatgttcaacccggcagagccccgactgctggctacagccaac
tccaaggaaggggtggggctgtgggacatacgcaaacctcgcacttctctgctgcggtac
ggcggtagcatgtccctccagagtgccatgtcggtgcgttttaacagcgcagggacccag
ctcctggccttgcgtcgcaggctacccccggtcctctacgagctacactctcgcctaccc
agcttccagttcgacaaccagggctacttcaactcctgtaccatgaagagctgctgcttc
gctggagacgaggatcagtacatcttgtctggatcagatgacttcaacctttacatgtgg
agaatccccaaggatcctgaagcaggaggcccgggtcgtgtggtcaacggagcgtccatg
gtcctgaaaggtcaccgttccatcgtgaaccaagtccggtttaaccccagcacttatatg
atctgctcctccggggtcgagaaggtcatcaaggcgtggagcccctaccagcagacggag
agtctgggagacctggatagtcttgtggaggataagtccaggagtctgtacagccacgag
gagtacatcaacttggtcctgaacagcggcagtggcctgagccacgactacgtctcacag
tccatccaggaggatcctcgtatgatggccttctttgactctctggttcgtcgggagatc
gagggctggagttcggactcagacagtgacctgagtgagggggccatcctgcagctccac
gccaggggacgacgctccacacggtctataagagacggcgccggggtcctggttgggagt
ggagtcgccacgcctgtaccgccctctgctgctgctaccgccgactcagaccactcctca
tcgtcctcattagctgcccccgaggcctctggggcggagcatcctgaaggggtggagcca
ctgcagccgaggaggcgtggcagcagatatcagcagtctgtgttcttattggacctggtg
ggagaggactctgactccagtggattctggccagaccccatgccccggcctcgctctccc
agcccccgagacaactccaccctctccagccccacctcgtcccccgccggcgcctcctct
agctcctcctcttccacctcctccaccagctctgaggacgaggagcagaggagagccagt
aggagacaacgtactgcagcccgctggcgccgcatgcatttcccccgcctgtccagtggg
gggcgccctgagtccgctcaggccttgtaccccgggggggtcgactcctgctcctacccc
aagatctcaatcgacgaggcctcatcctcctccgcgtcctccacggagcttcagcaggac
caggactcggttcagatcggaccccacagaagtggctctaaaacggggagacgcaagtcg
cacacccttcctggttctagccctgcggtgtctctggacagccaggacgaccgagcggag
caggaggggctcctcatcgcctcccttctgtctcaagacgccctgcagcagaggaacgag
tcccgggcaggaagggttggggagaggagggctgctttagagaggatggccgagggctta
gatagtcctgaagaggccgacgagtcagaccatagtcgctggatctcccctagttccaga
caccacagccctgggctgaacggactgcagcaccttgacatgactgaggtgccggtaggc
tgtaggggtcgcctggctccagacctatttgaatcctcagactccgagggagagagagag
accttagagttgaaatcagcaggcactaggaccctggtggaggaggaggagggggaggag
ggggggtcgtcatcgtctcagagaggcccatcccagggtgcgctgaaacggactcacctt
gggtcaagaggtcaagggtcaggggaagggtcaggggggtcggagacctcagagaagaag
ttaaagacatga
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integrated database retrieval system
