KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112238315
Entry
112238315         CDS       T05605                                 
Name
(RefSeq) integrin alpha-9-like
  KO
K06585  integrin alpha 9
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510  Focal adhesion
otw04512  ECM-receptor interaction
otw04514  Cell adhesion molecules
otw04810  Regulation of actin cytoskeleton
otw04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    112238315
   04514 Cell adhesion molecules
    112238315
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112238315
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    112238315
   04810 Regulation of actin cytoskeleton
    112238315
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:otw04515]
    112238315
Cell adhesion molecules [BR:otw04515]
 Integrins
  Integrin alpha subunits
   112238315
SSDB
Motif
Pfam: Integrin_A_Ig_1 Integrin_A_Ig_2 Integrin_A_Ig_3 FG-GAP FG-GAP_3 FG-GAP_2 Integrin_alpha
Other DBs
NCBI-GeneID: 112238315
NCBI-ProteinID: XP_042183323
LinkDB
Position
LG01:complement(92632103..92798396)
AA seq 1031 aa
MRQRMGHVLNQKRSLLDVLCVYLSVSVVHSYNIDLEHAVVFRGPDSSFFGYSVLEHYHDN
TRWVLVGAPKANSSYSSSLHTPGAVFKCRVHSNPERRCTEMNLGRGNKPRESCGKTCQGD
RDDEWMGVSLARQDIPNGKILACAHRWKNVFYDSELILPHGYCSIIPPTLQGRTQALIPC
YEDYKQKYGEEHGSCQAGIAGVFTEELVVMGAPGSYYWTGTVKVYNLTSNTFYNPNKEDI
DSHRYSYLGYAVTTGHFSSPNIIDVAAGAPQHSGEGKVYIFRINGVSLVKIFQASGTMMG
SYFGSSLCGVDLNRDGLSDLLVGAPMHSTLRDEGQVSVYLSKGNGVMEEAGLLNGDNAYS
AHFGECITAIGDIDDDGYQDVAIGAPKEDDYSGAVYIYHGDATGIVTKYSMRVSGQSINP
ALQMFGQSISGNVDMDSNGYPDITIGAFMADSVVLLRSRPVITVDVSIYLPVSINISVPQ
CHEGPQHLNCFNARVCLLFRGKHLPGQIELLYNLTADVDKRQRSQSSRVYFIQNGAQISF
MSNELSLDINREDCQQYTAYVKKDVKDVFTAITFEVAYTLGKHVVNGHLDKDLPALTPVL
RWRKGDQMAAKNETWFERNCLSDDCAADLRLHGKLLLSGLHVRSHLALGGVRNVSLNVTI
SNAGDDAYDTNIYFNFSRDVFYINYWQKEEKGISCGLVALDFLQCSVGFPFMRAKTKYHL
AVIFDTSRLSGENETLQFLVHAKSANPEHRLLDNKLDLSIPLVHEVDTAITGLVTPTSFL
YGNSIDASRFIQLEDMECNFQPLNFTFQVINNGPSRLPGSIVDIRIPNRLAGNGADMFHI
MDTQVAGGQGNCTPHRNPQPCSISQDRESIFHTIFAFFTKSGRRVLDCDRPGRACLTISC
TLGSQSKEEVVSIHVKLLLNTEILKRDSSSLIQFVTRGNVRVDGRAIEVPQGLSEDTSLV
FEALHSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRRYQEIIEAEKNRKDRA
DESWDWVEKNH
NT seq 3096 nt   +upstreamnt  +downstreamnt
atgcgccaaaggatgggtcatgttctgaatcagaagaggagccttttggatgttctctgc
gtgtatttgtctgtttctgtagttcactcctacaacattgacttagaacatgctgttgtg
ttccgtggacctgactcgagtttctttggatactctgttctggagcactatcatgacaat
acgcgctgggttctggtaggggcccccaaggccaactcttcctacagcagctcacttcac
accccgggagccgtgttcaagtgccgtgtccacagcaacccagagagacgctgcacagag
atgaacctgggccgagggaataagccccgggagtcttgtgggaagacatgccagggagac
agggatgatgaatggatgggggtcagcctcgcccggcaggacatacccaatggcaaaata
ctggcctgtgcccaccgttggaagaatgtcttctatgactctgagctcatccttccccat
ggttactgttccatcatccctcctacgctacagggccggacccaagccctcatcccctgc
tacgaagactataagcagaagtatggggaagagcacggctcgtgccaagcggggatagca
ggcgtttttactgaggagctggtggtgatgggagctccaggatcatactactggacagga
acagttaaggtctacaacctgacctccaacaccttctacaaccccaacaaagaagacatt
gactcacatagatacagttatctaggctatgccgtgactactggacacttctcctctcct
aacatcatagatgtggctgcaggagctccacaacacagtggagaggggaaagtttacatt
ttcagaatcaatggtgtgtctttggtgaagatctttcaagcctcggggacaatgatgggc
tcttactttggctcctcattatgtggagttgacctgaacagggatggcctgtcggacctg
ctggttggagcgcccatgcacagcacgctacgggacgagggacaggtctctgtctacctc
agcaaaggcaacggtgtgatggaggaagcaggactcttaaatggtgataatgcctacagt
gcacactttggagagtgcatcactgcaatcggagacattgatgacgatgggtaccaagat
gtggccataggagcacccaaagaagatgactacagtggagcggtttacatttaccatggt
gatgccacaggaatcgtcaccaaatattctatgagagtgtctggacagagcattaacccc
gccctccagatgttcggccaatcaatctctggcaatgtggacatggacagcaatggatat
ccagatattaccattggtgcttttatggctgatagcgtggtgttattgaggtcccggccg
gtgatcactgtggacgtgtctatctacctgcctgtctccatcaacatctctgtgcctcag
tgtcacgagggaccccaacacctcaactgtttcaacgcaagagtctgcctgctcttcaga
ggaaaacacctgccaggacagatagagttgttgtataacctgacagctgatgtggataag
aggcagaggagccagtcttccagagtgtacttcattcagaacggagcccagatcagcttc
atgagcaacgagctcagtctggacatcaacagagaggattgccaacagtacactgcatat
gttaagaaggacgtgaaagacgtattcacagccatcacctttgaggtggcctacaccctg
gggaagcatgtggtgaacggtcacctggacaaagacctgcctgctcttacacctgtactg
cgctggaggaaaggagaccagatggcagcaaagaatgagacatggttcgagaggaactgc
ctgtctgatgactgtgctgctgacctgagactccatgggaaactactgctttctgggctc
cacgtgcggtcccatctggccctaggaggagtgaggaatgtctctctgaacgtgaccatc
tccaacgcaggggacgatgcctacgacaccaacatctacttcaacttctccagagatgtc
ttctatatcaactactggcagaaggaagagaagggcatttcctgtggtcttgttgcttta
gacttcctccaatgcagcgtgggatttcccttcatgagagcaaagactaagtatcatctt
gcagtgatcttcgacacaagtcggctttcaggggaaaatgagacattgcagtttttagtt
catgcaaaaagtgccaaccctgagcataggctgttggacaacaagttggatctgtctatc
ccactggtccatgaggtggacacagctatcactggtttagtgactccaacatcctttctg
tatgggaactccatcgatgcctctcgcttcatccagctggaggacatggagtgtaacttc
cagcctttaaacttcacctttcaggtgatcaacaacggccccagcaggttacctggctcc
atagtggacatcaggatcccaaaccgactggctggcaatggggccgacatgttccacatc
atggacacacaggtggcgggggggcaagggaactgcacccctcataggaacccccagccc
tgttccatctcccaggacagagagagtatcttccacaccatctttgccttcttcaccaag
tccggacgcagggtcctggactgtgaccggccagggagagcatgtttaaccatctcatgt
actctgggctcccagtccaaagaggaagttgtcagtatacatgtgaaactcctactaaac
acagagatactgaagagggacagctcatcgctgatccagttcgtgactaggggtaatgtg
agagtggacgggagggccatagaggtaccgcaggggctatcagaagacacttcactggtg
ttcgaggcgctccacagccaggagccaagaggatatgttgttggttggatcattgccatc
agcctgctggtgggaatactcatcttcctactgctggctgtgctgctctggaagatgggt
ttcttccgccggcgctaccaggagatcatcgaggccgagaaaaacaggaaggacagagct
gacgagagctgggattgggtggaaaagaaccactga

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