Oncorhynchus tshawytscha (Chinook salmon): 112238336
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Entry
112238336 CDS
T05605
Name
(RefSeq) glutamate receptor 3-like
KO
K05199
glutamate receptor 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112238336
04082 Neuroactive ligand signaling
112238336
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112238336
Ion channels [BR:
otw04040
]
Ligand-gated channels
Glutamate (ionotropic)
112238336
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
DUF2061
Motif
Other DBs
NCBI-GeneID:
112238336
NCBI-ProteinID:
XP_042181971
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All DBs
Position
LG08:complement(80223428..80390787)
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AA seq
785 aa
AA seq
DB search
MNTLTSFCGALHTSFVTPSYPTDNEVQFVIQMRPALRGAVLSLLSHYKWQKFVYLYDTDR
GFSILQAIMESAVTNNWQVTARSVGSITDAAELKRIIEEMDRRQEKRYIIDCEVDRINTI
LGQVVSLGKNARGYHYILSNLGFSNVSLDKVFQGGANISGFQIVSPENSIVQQFLQRWER
LDEREFPEAKNTPLKYTSALTHDAILVIAEAFRYLRRQRVDVSRRGGAGDCLANPAVPWS
QGIDIERALKMVQVQGMTGNIQFDSYGRRSNYTIDVYEMRTGGPKKIGYWNEYQRLVNVL
EQQVVANESSSVENRTIVVTTIMEAPYVMYKKHQMNLEGNDRYEGYCVDLAAEIAKHVGI
RYKLSVVADGKYGARDPDTKTWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSL
GISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWNLDEQDE
TKDPQTPPDPPNDFGIFNSLWFSLGAFMQQGCEISPRSLSGRIVGGVWWFFTLIIISSYT
ANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFRRSKIAVYEKMWSYMKSA
EPSVFVKTTPDGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATP
KGSALRTPVNLAVLKLSEQGILDKLKNKWWYDKGECGTKDSGSKDKTSALSLSNVAGVFY
ILVGGLGLAMMVALIEFCYKSRAETKRLKLAKNAEKFKPAPPTNPQNFATYREGYNVYGT
ESVKI
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccctgacgtcattctgtggtgcgctacacacctccttcgtcacgcccagttac
cccaccgacaacgaggtgcagtttgtcatccagatgagacctgcactgcgtggggccgtc
ctcagcctgctgtcacactacaagtggcaaaagtttgtctacctctacgacactgacaga
ggtttctctatccttcaggccatcatggagtcagcggtgaccaacaattggcaggtgacg
gctcggtctgtggggagcatcacggacgcagcagagttgaaacggatcatcgaggagatg
gacaggaggcaggagaaacgctacatcatcgactgtgaggtggacaggatcaacactatc
ctaggacaggtggtctctctggggaagaacgcccgtggataccactacatcctgtcgaac
ctgggtttctccaatgtgagcttggacaaggtcttccaaggcggggccaacatatcaggc
ttccagatagtgagccctgagaactccatcgttcagcagttcctacagcgttgggagaga
ctggatgaaagggaattcccagaggccaagaacaccccgctcaagtacacgtcagctctg
acccacgatgccatcctggtgatcgcagaggccttccggtacctgcggcgccaacgggta
gacgtgtcacgccgaggaggcgcaggagactgtctggccaaccctgccgtaccatggagc
cagggcatcgacattgagagagctctcaaaatggtccaggttcaggggatgacggggaac
atccagtttgacagctatggccggaggtccaactacactatagacgtctatgagatgaga
acagggggaccgaagaagattggctactggaacgagtaccagcgattagtaaatgtgtta
gaacaacaggtggtcgccaacgagtcttcttctgtggaaaaccgaacgattgtggtcact
actattatggaagccccttatgtgatgtacaagaaacaccagatgaatctggaggggaat
gacagatatgaaggctactgtgtcgatttagctgccgaaattgcaaaacatgtggggata
agatacaaactgtcagtagtagcagacgggaagtacggtgcgcgggatccagacaccaag
acgtggaacgggatggtgggggaactggtctatgggagagcagatatagctgtggcacct
ctcaccataaccctggttcgtgaggaagtgatcgacttctccaagcccttcatgtctctg
ggcatctccatcatgatcaagaagccccagaagtctaaacctggtgtcttctccttcttg
gacccgctggcctatgagatatggatgtgtatcgtgttcgcctacatcggtgtgagtgtg
gtcctgttcctggtcagccgcttcagcccttatgagtggaacctggatgaacaggatgag
accaaagacccccagacacctccagatcctcccaacgactttggcatcttcaactctctg
tggttctctctgggagccttcatgcagcaaggatgtgagatatcacccaggtccctatca
gggagaatagtagggggcgtgtggtggtttttcactctcatcatcatctcgtcctacacg
gccaacttggctgctttcctcaccgtggagaggatggtgtcccccatagagagtgctgag
gacctggctaaacagactgagatcgcctacggaactctggatgctggttccaccaaggag
ttcttcaggcgatccaaaatagcagtctatgagaaaatgtggtcatacatgaaatcggcc
gaaccgtcagtgtttgtcaagaccacgccagacggggtggcccgggtacgaaagtccaag
ggcaagtttgctttcctcctggagtccaccatgaacgagtacatagagcagaggaaaccc
tgtgacaccatgaaagtgggcggaaacctcgactctaaaggatacggtgtggccacgccc
aaaggctcagcattaagaactcctgtaaaccttgccgtattgaaactcagtgaacaaggc
atcttagacaagctgaaaaacaaatggtggtacgataagggtgaatgtggaaccaaggac
tctggaagtaaggacaagacaagtgctctcagcctgagcaatgtggctggagtcttctat
attctggttggagggctggggctggccatgatggtggcactgattgagttctgttacaag
tcacgtgcagaaaccaaacggctcaaactagcaaaaaatgctgaaaaatttaagccagct
ccaccgaccaacccccagaactttgccacttacagagaaggctacaacgtgtatgggaca
gagagcgtgaagatctaa
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