Oncorhynchus tshawytscha (Chinook salmon): 112238407
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Entry
112238407 CDS
T05605
Name
(RefSeq) vascular endothelial growth factor receptor 3-like
KO
K05097
FMS-like tyrosine kinase 4 [EC:
2.7.10.1
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04020
Calcium signaling pathway
otw04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112238407
04020 Calcium signaling pathway
112238407
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112238407
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otw01001
]
112238407
Enzymes [BR:
otw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
112238407
Protein kinases [BR:
otw01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
112238407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
ig
Ig_2
VEGFR1-3_N_Ig-like
Ig_VEGFR-1-like_5th
V-set
VEGFR-2_TMD
VEGFR-1-like_Ig-like
C2-set_2
Ig_6
C1-set
Haspin_kinase
Herpes_gE
DUF6292
Motif
Other DBs
NCBI-GeneID:
112238407
NCBI-ProteinID:
XP_042182271
LinkDB
All DBs
Position
LG08:88950705..89142727
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AA seq
1390 aa
AA seq
DB search
MKRDLTCFCRIWFGIAASSGLVIGYSMTPPTLDSPKEDLVIHADETLTITCRGQRTLSWV
WPETTLVGEELTDRQVGPRPSRAPGREAETGSGTPVCTPGAGVVGGHPVAAEGAGTPASV
PIQRRGVSILECPGEPGRPYCKTLVLTGAKGNDTGYYRCYYRDVKAVIDGTTAATLYVFV
RDLEQPFLRRNRGSNDLETIFISRSSTHVTVPCLVTVPDLNVTLYLWETMSMPLEDEGMV
WDSKRGWSIPRQTLDSRPFLFGLYCQAGLQGRVYRSPHYVVHFTGSQLYDVKLYPEDSVE
LIMGEALTLSCNATVEFGMFVEFRWSYPGKQMNSTVGIVHKRNSLSRFTEAVSILTIQSV
NVTDTGTYTCSAITVEKQMDLATQVIVHEKPFISLDYRSSPVVEATSGQKSFKLLAKVSA
YPKPDIQWYKGDKLISRRPEFNRMRLHQHYNLEIRDVHPEDAGNYTILLKNTVALLERRI
TITLIVNVPPQIHEKEIAAPSSPYRRGSSQTLTCTGYGRPAPNITWQWRRWSPCGLNSTH
RMSRRDRKGRSDSVSDCQNWQDLDSQNTVNKIENIETSVEVVDGRQKIVSRLVIQNASVS
VMYKCSANNKVGKDQKLIYFYVTTIPEGFSVELGPSEEPLEQEEVSLSCIADNYTYEQLT
WYRLDPQALQDERGKPLELDCRSVHLYADRLDGQLTYQEQSNSWVLEMTIASITLQDEGN
YVCEVQNRRSREKHCLRKYISVKALEAPWYRHNPTNQTVNISESLLMECDVMGTPSPHLS
WFKDNQPLHQMSGLQLQDANRTLSIQRVREEDAGLYTCTACNQRGCAHSSAAITVLGSSD
RANVEIVILIGTGVFAVFFCALLILIFCNVKRVNPADIKTGYLSIIMDPGEVPLIEFLSG
KVLGHGAFGKVIEASIFGVSKKSSLDTVAVKMLKEGACASDHKALMSELKILIHIGNHLN
VVNLLGACTKPSGPLMVVVEYCKYGNLSNYLRAKREFFLPYRDRSPKTQSQVRRMIEAGQ
VEQRARLPPSTSSSSIGSPQSQSSSKSNQKSPSPAVEKMEDLWKTPLTIEDLICYSFQVA
RGMEFLASRMCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGNARLPLKWMA
PESIFDKVYTSQSDVWSFGVLLWEIFSLGASPYPGVQIDEDFCKRLKDGTRMRAPETASP
EIYGIMLACWQGEPRERPPFQALVDILGDLLQDDSLPIRPASQEEMRLACHSLPIRYYNC
VPFAGCVFVGPSKLSSCQPRVKTFEELPMETAWYKPHNNGDNQTDSGMVLASEEFEMIQH
EHRGANSTERLVVVESSGSSVSSRHRPAFLSQLSGQTFYNNEYGQLSEEGRVLDFFSSPD
DTRCLASSNL
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagatttgacgtgtttctgtcggatttggtttgggatcgctgcttcttcaggg
ttggtgattggctattctatgactccgcccacccttgacagccccaaagaagaccttgtg
atccacgcagatgaaacactgaccattacatgcaggggtcagcgtactctgtcctgggtg
tggcctgagacgaccctggtgggagaggagctgactgaccgtcaggtcggacccaggccc
agcagagccccagggagagaggccgagactgggtctggaacccctgtttgtacccccggg
gctggagttgtgggaggccaccccgtggccgcggagggggctggtacgcctgcttcggtc
cctatccagagaaggggagtcagcatcctggagtgtccaggggagcctggaaggccgtat
tgcaagaccctggttctcactggagctaaagggaatgatacagggtactaccgctgttac
tacagagatgtcaaggctgtcatcgacgggaccacggctgccactctatatgtgtttgtc
agagatttggagcagcctttcctcaggagaaacagaggaagcaacgacctggagaccatc
ttcatatcaagatcctccactcacgtcacagtaccttgtctagtcactgtgcccgatctc
aacgtcacactttatctgtgggagacaatgtctatgcccctggaggatgaggggatggtg
tgggacagtaaaagaggctggtccatccctagacaaaccttagactccagaccgttcctc
ttcggattgtactgccaagctggactacaggggagagtgtaccgctctccccactatgtg
gttcacttcacaggaagtcagctttacgacgtcaagctgtatccagaggactcggtggag
ctgatcatgggggaggccctgacgctcagctgtaatgccacggtagagtttggcatgttt
gtcgagttccggtggtcatatcctggaaaacagatgaacagtacagtgggcatagtgcac
aaacgtaattctctctctcggttcacggaggccgtcagcatcctgaccatccaaagcgtc
aacgtcaccgacactggcacttacacctgctctgccatcactgtggagaaacaaatggat
ctggcaactcaagtcatagtgcacgagaagccattcatcagcctagactacaggagcagc
ccggtcgtcgaggcaacatcaggacagaagtcctttaaactgttagccaaggtgtcagca
taccccaaacctgacatacagtggtataaaggtgataagttgatcagccgtcgtccagag
ttcaacaggatgcgtctccatcagcactataacttagagatcagagacgttcaccctgag
gatgctgggaactacaccatcctcctcaagaacacagtggccttgctggagaggagaatc
accatcacactcatcgtcaacgttccccctcagatccatgagaaggaaatagcggcacca
tctagcccatatcgccgtggcagcagccagaccctcacctgtacagggtacggacgtccc
gcccctaacatcacctggcagtggaggagatggagcccctgtggcctcaacagcacccac
cgcatgagtcggagggatcgtaaagggcgtagcgacagcgtctcagactgtcagaactgg
caggacctggactcacagaacaccgttaataaaatagaaaacatcgagacgtcagtcgaa
gtcgtggacgggaggcagaagatagtcagcagactggtgatccagaacgccagtgtatca
gtcatgtataaatgttctgctaacaacaaagtgggtaaagaccagaagctgatatacttc
tatgtgaccactatcccagaagggttcagtgtagagctgggtccgtctgaggaacctctg
gagcaggaggaagtgtcgctaagctgcatcgctgacaactacacctatgaacagctcacc
tggtacagactggacccgcaggcgctgcaggatgagcgtggtaaacccctggagctggac
tgtcgtagtgtccacctgtacgctgaccgcctagatggacaactgacctatcaggagcag
tctaacagctgggtcctggagatgactatagctagcatcacactacaggatgaagggaac
tatgtctgtgaggttcagaataggaggagccgagagaaacactgtctacgcaaatacata
tcggttaaagctctagaagccccctggtacagacacaacccgaccaatcagacagtgaac
atcagtgagtctctcctgatggagtgtgatgtaatgggaactccttcaccacacctctcc
tggttcaaagacaaccagcccctgcaccaaatgtcaggactgcagctacaggacgccaac
aggactttgagtatccagcgagtcagagaagaggacgccggtctctacacctgcaccgcc
tgtaatcagaggggctgcgcacactcctccgctgccatcacagtgctgggttccagtgac
agggctaacgtggagatcgtgattctgattgggacaggcgtcttcgctgtgttcttctgt
gctctactcatcctcatcttctgcaacgtcaaacgggtgaacccagcagacataaagaca
ggctatctgtccatcataatggacccaggggaggttcctctgatagagtttctctcaggg
aaggtgttgggtcatggagcgtttgggaaggtcatcgaggcctccatctttggagtcagc
aagaagagcagcctggacactgtggcggtgaagatgttgaaagagggagcgtgtgccagt
gatcacaaggctctgatgtcagagctgaagatcctgatccacattgggaaccatcttaac
gtggtcaacctcctgggggcatgcaccaaacccagcggccccctcatggtggtggtggag
tactgcaagtatgggaacctgtccaactacctgagagccaagagagagttcttcctacct
tacagggaccgctcccctaagactcagagccaggtgagacgcatgatagaggcgggacaa
gtggagcagagagcccgcctcccaccttccacatcctcctcctctattggcagcccccag
agtcagtcatccagcaagtccaatcagaagagcccctctcctgctgtggaaaagatggag
gacctatggaagactcctctcactatagaagatctgatctgctatagtttccaggtggcc
agaggaatggagttcctggcctcgcgaatgtgtatccacagggaccttgcagcgaggaac
atcctgctgtcagagaacaacgtggtgaagatctgcgacttcggcctggctagagacatc
tacaaagaccccgactacgtcaggaaaggcaacgcccgtctgccactgaagtggatggct
ccagagagtatctttgacaaggtctacaccagccagtctgacgtctggtcctttggtgtt
ctactctgggagatcttctctctgggtgcatctccgtacccaggtgtccagatcgatgag
gacttctgtaaacgactgaaagatggaactaggatgagagctcctgaaacagcatctcct
gagatctatggtataatgctggcctgctggcagggcgagccccgagagagacctcccttc
caagccctggtagatatcctgggagacctactacaggacgacagcctaccaattcgaccc
gcttcacaggaggagatgagattggcttgtcacagcctgcccatcaggtattataactgt
gtgcccttcgcgggctgtgtgttcgtggggccgtcgaagctgtcgtcatgccaacccaga
gtcaagacgtttgaggagctaccaatggaaacggcctggtataaaccccacaacaacgga
gacaaccagacagacagtgggatggttttggcgtcagaggagtttgagatgatccaacac
gaacacagaggagccaatagtacagagcgcctggtggtggtagagtccagcgggagctcc
gttagttccagacaccgaccagccttcctctcccagctctctggccagaccttttacaac
aacgagtatggtcagctgtcagaggagggcagggtcctggacttcttctcctcccctgat
gatacacgctgcctcgcatcctccaacctgtga
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