Oncorhynchus tshawytscha (Chinook salmon): 112238440
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Entry
112238440 CDS
T05605
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112238440
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
112238440
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
112238440
NCBI-ProteinID:
XP_024262787
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Position
LG13:complement(12606227..12621826)
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AA seq
582 aa
AA seq
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MDRLPKERETWANRAEFILSSVGYAVGIGNVWRFPYVCFSDGGGAFLIPYLTMMCLCAIP
LVFMEFTVGQYTKRGPVEAFIDICPLMKGVGVAMVMLSFIVASYNNTVLTWVLYYLFHSF
TAPLPWQLCNATWNIPENCSSFMENTTTHLQSATKQFFDHRLLEITEGIETVGHLRWELV
GILLLIWAILFFSVFKGIRSTGKVVYFTALFPYVVLLALLFNNIRLPGALDGILFFLTPK
WNKLGEIHVWIDATAQIFYSIGIGFGCLLSMASHNKVNNNILRDAMIVTLANSATSIFAG
FVMFSGIGYMAHVRHLQVEQLAVEGPGLAFVVYPEIFSTMPVSQLWAFLFFLMLMCLGLD
SQFALVEVMGTFVMDSFGPKILLMLNYKELVTLLLCFLTFLFGLPCITQGGVYIFQLLDY
SVGITLMFTSLFEVVTLSWIFGVWRLSIMVKRILGKPPNIFFKACWLVVSPLLIVAILVT
AMVQHKPLLYEKTYLYPAWAEGVAWIIIFLSVGWIPLGAMHELLGRKGTCLARLKASVTP
RITLEEVCNVPVNEDQHQDHVKSLYSLSEVSPLREEKDRGDM
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggacagactaccaaaagaaagagagacatgggccaatcgtgcagagttcatcctttct
tcagtaggctatgcagtcggaattggaaatgtgtggcgctttccatacgtctgcttcagc
gatggcggaggtgcattcctcattccctatctcaccatgatgtgtctgtgtgccatccct
ctggtgttcatggagtttacagtggggcagtacacaaaaagaggacctgttgaggcattc
atcgacatctgtcctctaatgaaaggtgtgggtgtggctatggtgatgctgtccttcatc
gtggcctcctacaacaacacagtcctgacctgggttctgtactacctcttccactccttc
acagccccgttgccatggcagctctgtaatgccacctggaacattccagagaactgttcc
agcttcatggaaaacaccaccacacacctgcagtccgccactaaacaattctttgaccat
aggctcctggaaatcactgaggggattgagactgtgggccacctgcgatgggagctggtt
ggaattctcctgctgatctgggccatcctattcttctctgtcttcaaggggatcagatcc
actggcaaagtggtgtacttcacagcactgtttccatatgtggtccttctggctcttctg
ttcaacaatatccgactaccaggagccctggatggcatcctgttcttcctgacacccaaa
tggaacaaactgggagagatacacgtatggattgatgctactgctcagatcttctactca
ataggcattggatttggctgcttactgtctatggccagccacaacaaggtcaacaataac
atcctcagggatgcaatgattgtcactttggcgaactctgccaccagtatttttgctggc
ttcgtcatgttctctggcatcggctacatggcacatgtgcgccacctccaagtggagcaa
ctggctgttgaaggacctggtttggcatttgtggtttacccagagatcttcagcaccatg
cctgtctctcagctctgggccttcctcttcttccttatgctgatgtgtctcggcctggat
agtcagtttgcccttgtggaggtcatggggactttcgttatggacagctttggcccaaag
attctcctcatgctgaactataaagagctggtgaccctattactctgcttcttgaccttc
ctgtttggccttccctgcattactcagggcggggtctacatcttccagctgttagactat
tctgttggcataacactgatgttcacttctttatttgaagtcgttactctaagctggata
tttggagtatggcggctctccatcatggtgaaaaggattctgggaaagcctccaaacatc
ttctttaaggcctgctggttggtggtctctccgctgttgatcgtggccatattggtcact
gccatggtccagcacaaaccacttctttacgagaagacatatctctacccagcatgggct
gaaggtgttgcatggatcatcatctttctgtccgttggctggatccctcttggagccatg
catgagcttcttggaaggaaaggcacttgtttagcgaggctgaaggcgtcggtgactccc
aggatcaccctggaggaggtctgtaatgtgcctgtcaatgaagaccaacaccaggaccat
gttaagtctctgtacagcctctctgaggtcagtcctctacgtgaagagaaagaccgtggg
gacatgtag
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