Oncorhynchus tshawytscha (Chinook salmon): 112238478
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Entry
112238478 CDS
T05605
Symbol
sparta
Name
(RefSeq) spartin a isoform X1
KO
K19366
spartin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112238478 (sparta)
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Gene cluster
GFIT
Motif
Pfam:
Senescence
MIT
UBA_Rad5
Motif
Other DBs
NCBI-GeneID:
112238478
NCBI-ProteinID:
XP_042167404
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All DBs
Position
LG33:complement(42187530..42208178)
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AA seq
634 aa
AA seq
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MISSLQQDMSLAEPAELLLIRDQYDRALECLTRGLAADQAGQGPQALELYRRGRQHLTLG
LEVPTRGPQNQGAPWDTARQLQQKMRETLTNISTRLANMETAGVGTAGQGGPALVDLVDL
SSQCLYPTLGPLVPPMPLPGSSNPLPHLYPTLPPGATPTDSLSAGATGITMAPSLPILPA
LPLGLPGEQPPAYTPQPTDGHHSLAYSPTGGGGLALGGQMVGGPPQPEGGVGGDGEELLF
LPRGVQMFFVSSDGQVSAPSYPGYLRIIRFSSQLKDMANGGASAFLHVCDWLYPLTPDTP
VLLSTSGIFMFPDTMAGIPGSYVGVVLSSELPAADRHAFQDLLSQLTELRVQAPEEGAGS
EIMNLSEKVPIGPPVEGAGAGTGEEELPLPEWSEKMSQGILAGASWLSKGFVRGAEATGK
AIQKGASKLREHITPENVPAEVSPGVTKGLHHAKQATGGAVRVSQFLVDGVCTVVGCVGE
KLAPHVKKHGSKLIPESMKNTKDGRSNLDGAMVVAVSSIKGLSAMWTGLETGAKNIGKSV
TSETVMTVKHKYGDDVSKATNTGIQSVINVGVAAFNVDNLGIKGVLKTAGKQTAKAVVKE
RNNTPQVAVGDHNHNGGPEEKEMWERKKDEEDKK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgatctccagcctgcagcaagacatgtcgttggcagagccagcagagttgctgctgata
agggaccagtatgaccgtgcgttggagtgtctgaccaggggcctggcggctgaccaggca
gggcaggggccccaggccctggagctgtacaggaggggccggcagcacctaaccctgggc
ctggaggtccctaccagggggccacagaaccagggagccccctgggacacggccaggcag
ttgcagcagaagatgagggagactctaactaacatcagcacccgactagcaaacatggag
acagcaggggtggggacggcgggccagggaggcccagcgttggtggatctagtggatctc
tcttcccagtgcctctaccccaccctggggccattggtgccccctatgccgctgcctggt
tcctccaaccccctcccccatctctaccccacactgccacccggggctaccccaacagac
agcctctctgccggggctacaggcatcaccatggccccctccctgcccatcctccctgcc
ctgcccctggggctcccaggagagcagcccccagcctacaccccccagcccaccgacggg
caccacagcctggcttatagcccaaccggaggagggggtctggcgctgggggggcagatg
gtggggggacctccacagcccgagggaggggtagggggggacggagaggagcttttgttc
ctccctcggggagtgcagatgtttttcgtgtcgtcggatggccaggtgagcgccccatcg
tacccgggttatctacgcatcatcaggttcagcagccagctcaaagacatggccaacgga
ggagcatcagccttcctacatgtgtgtgactggctgtaccccctgactccagacacccca
gtacttctgtctacctctgggatctttatgtttcctgacaccatggcggggatacccggg
tcctacgtaggggttgtgctgtcctctgaactgcctgcagcagacagacatgcctttcag
gacctcctctcacaactcactgagctacgggtacaggctccagaggagggggcagggtca
gagatcatgaacctgagtgagaaggttcccattggtccccctgtggagggggcgggagca
gggacaggggaggaagaactccccctacctgaatggagcgagaagatgtcccaaggcatc
ctggcaggtgcatcgtggctgagtaaagggtttgtgcgtggagcggaggccacaggtaag
gccatccagaaaggagcgtctaagctgagagaacacatcaccccagagaacgtcccggct
gaggtcagccctggtgttaccaagggcctgcaccatgctaaacaggccaccgggggcgct
gttcgcgtcagtcagttcctggtggacggagtgtgtaccgtagtaggctgtgtgggggag
aagctggctccgcatgtaaagaaacatggcagtaaacttatccctgagtccatgaagaac
actaaagatggccgctccaacctggatggcgctatggtggtggcagtcagcagcataaag
ggtctctccgcaatgtggactggtttggaaactggagctaagaacatcggcaagagtgtc
acctctgagacggtcatgaccgtgaagcataagtacggcgatgacgtgagcaaagccacg
aacacgggcatccaatcagtgatcaacgtgggcgtggccgcgttcaacgtggacaacttg
ggtatcaagggtgtcctgaagaccgccggaaaacagaccgctaaagctgtggtcaaagag
cgaaacaataccccgcaggtcgcagtcggagaccacaaccacaacggaggaccagaggag
aaagagatgtgggagaggaagaaggatgaggaagacaagaaatag
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