Oncorhynchus tshawytscha (Chinook salmon): 112238507
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Entry
112238507 CDS
T05605
Symbol
vps33b
Name
(RefSeq) vacuolar protein sorting-associated protein 33B isoform X1
KO
K23281
vacuolar protein sorting-associated protein 33B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112238507 (vps33b)
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Others
Others
112238507 (vps33b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Rhabdo_ncap_2
XRN1_D1
Motif
Other DBs
NCBI-GeneID:
112238507
NCBI-ProteinID:
XP_042174552
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MAHSVRRDAPELPDFSLLKRLARDQLIYLLEQLPGRKDLFIEADLMSPLDRIANVTTLKQ
HDVDKLYKVEHKPIVSTSDQLCFLIRPRIKTVKWICDVVNADKAFGRFRRYKIIFSPQKF
YACENLLEEQGIFGDVTTDEWSFYLLPLDDDIISLELPEFFRDYFLEGDQRWVRTAGSAL
HLLHSVYGPFSKVYGIGRCSKMAYESWREQVEEGEQRARQAEIGNVFLIDRDVDLVTPLC
SQVVYEGLVDDIFRIKCGCVEFCPDVTSSDKSIKVMLNSQDKVFNEIRNEHFSQVFGFLS
QKARNLQTAYDKRSGMDIKQMKTFVSEELKGLKQEHRLLSLHIGASESMMKKKTKQDFQE
LLKTEHSLLEGFEIRECISYIEEHINRQVSMVESMRLLCLLSLTENGLLPKDYRSLKAQF
LQSYGIEHLLTFSNLKQLGLLVEQQPGETLTVMESRVGKLVNDKTAGKLTDAFSSLAKKS
NFRALGRRLNLVPKSDEEYDLRVPRDMAYIFSGAYIPLSCKLIEQVLERDGWTGLEEVTR
MLNGHEFAVTAGSNGSDARVKTDSQRIILVMFLGGCTFSEISALRFLGREKGLKFIVVTT
AITNSARLLESMLDNHA
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggctcacagtgtcaggagagatgcccctgagctccctgacttctctctgctcaagagg
ctggccagggaccagctcatttacctgctggaacagctacctgggaggaaggacctgttc
attgaggcagatttgatgagccccctggaccgcattgctaatgtcacaacactaaagcaa
catgatgtggacaagctttacaaagtggaacacaaacccattgtcagcacctcagatcaa
ctatgcttcctgatccgtccaagaataaaaactgtcaagtggatatgtgatgtggtcaat
gcagacaaagcatttgggagattcagaagatacaagatcatatttagccctcagaagttt
tatgcatgcgagaaccttttggaggagcagggaatctttggtgatgtgactactgacgag
tggtcattctacctcctgcccctggacgatgacatcattagcttggagcttccggaattc
ttcagagactacttcttggagggagaccagcgctgggtgagaacagcgggtagtgccctg
catctcctacactctgtctacggccccttctctaaggtgtatgggatcggacgatgctcc
aagatggcgtatgaatcgtggagggagcaggtggaggagggggaacagagagcgcgtcaa
gcggagatcggaaatgtgtttctcattgacagagatgtggaccttgtgactcctctgtgt
tcccaggttgtctatgaaggacttgtcgatgatattttcagaattaaatgtggatgtgtg
gagttttgtccagatgtcacctcctctgacaagagtataaaagtgatgctaaactctcaa
gataaggtttttaacgagatcaggaacgagcatttctcccaggtgtttggcttcctaagt
caaaaggcccgaaacctccagactgcatatgataagcgtagtggaatggatattaaacag
atgaagacgtttgtgtcggaggagctgaaagggttaaaacaggagcatcggctcctcagt
ctgcatattggtgccagtgagtcgatgatgaagaagaaaacgaagcaggacttccaagag
ctgttgaagacagagcactccttactggaggggtttgaaatccgtgaatgtatttcttac
atagaggagcatatcaatagacaggtctctatggtggaaagtatgagactcctttgtctg
ttgtctctcacagaaaacggcctccttcccaaagattatcggtcattaaaagcccagttt
ctacagagttatggcattgaacacctactgacgttttccaacctgaagcagctaggcctg
ctggtggagcagcagcctggagaaaccctcactgtcatggagagcagagtgggcaaactg
gtcaacgacaaaaccgcaggaaagctgactgatgccttctcctccctggccaagaagagc
aatttccgtgccttgggcaggaggctcaatctggtgcccaagtcagatgaagagtatgac
ctccgtgtccctcgagacatggcctatatcttcagtggagcctacattcctttgagctgc
aaactcatcgaacaggtattggagcgtgatggctggacagggctcgaggaagtcacccgc
atgctcaacggacatgaatttgcagtcacagcaggtagtaacggatcagacgcaagggtg
aagaccgattcccagcgtatcatcctagtcatgttcctgggtgggtgcaccttctcagag
atctcagcactacgcttcctgggcagagagaaaggtcttaaattcattgtggtgaccaca
gctatcacaaacagtgccagacttctggagtctatgttggacaaccatgcatga
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