Oncorhynchus tshawytscha (Chinook salmon): 112238527
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Entry
112238527 CDS
T05605
Name
(RefSeq) signal transducing adapter molecule 2
KO
K04705
signal transducing adaptor molecule
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112238527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112238527
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
112238527
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VHS
SH3_1
SH3_9
SH3_2
UIM
GAT
SH3_10
Motif
Other DBs
NCBI-GeneID:
112238527
NCBI-ProteinID:
XP_042175315
LinkDB
All DBs
Position
LG03:complement(51193446..51208506)
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AA seq
506 aa
AA seq
DB search
MPLFAQNPFDQDVEKATNETNTVEDWALIMDICDRVGHTPNGAKDCLRSVMKRVNHKVPH
VAMQALTLLAACVNNSGRIFHLEICSRDFATEVRAILSRAHPKVCDKLKGMMVEWCDEFQ
KDPQLSLISATIKSLREEGVAFPSSGSQGSSLKVTTPAVSKPSDDDDLAKAIELSLQEQK
QHAETRPLTVSADPPFNTNGGGGSKDSRKVRALYDFEAAEDNELTFKTGELILVLDDSDS
NWWKGENHRGVGLFPSNFVTTNLNAEPELVTYVEKTPSPEEPKIEAIVESEPVFIDEEKM
DGALYLLQNTDPADAAPDCPELVQLEGACEQMNPMIDDKLEDIDRQHSELSELNVKVLEA
LELYNKLMNEAPFYTAYSKLQSQQQPHYAPASQLPMQGYPGQAGGSYMPPGMPQGPPGQQ
AYMSSDQPGPLQSLPPNVTSPNGQPAQLPYSSPYAPAGYPPQMGVAPQMDMSAYQNSNLP
PASYQMAASSHQTPQQQQAYYQQPLL
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcctttatttgcgcagaatccattcgaccaagatgttgagaaagcaaccaatgaaacc
aatacagtggaggactgggccctgatcatggatatctgtgacagggttggacatacaccc
aatggagctaaggactgcctgaggtctgtgatgaagagagtaaaccacaaggtcccacac
gttgccatgcaagccctcaccttgctggctgcctgtgtcaataacagtggaagaatcttt
cacttagaaatctgctcacgggactttgccactgaagtccgagctatattgagcagggcc
caccccaaggtgtgtgataagctgaaggggatgatggtggagtggtgtgatgagttccag
aaagatccacagctcagtctgatcagtgccaccattaagtctctgagagaggagggggtc
gccttcccgtcttctggctcacaggggtccagcttaaaggtcaccacacctgctgttagt
aaaccatctgacgatgatgaccttgccaaagctatcgagctgtccctgcaggaacagaag
cagcatgctgagacgcggcccctcaccgtgtccgccgacccccccttcaacaccaacgga
ggcgggggtagcaaggactctcggaaggtgcgggcgctctacgactttgaggccgccgaa
gacaacgagctcactttcaagacgggggagctcattctagtcctggacgacagtgattca
aactggtggaaaggagagaaccacagaggagtaggtctcttcccatccaactttgtcacg
accaacctcaatgctgagcctgaactagtaacgtatgtggagaagacaccatccccggag
gagcccaaaatagaagccatagtggagtctgagcctgtctttatagatgaggagaagatg
gatggagcgctgtatctgctccagaatactgaccctgctgacgcagcacctgactgccca
gagctggtccaactggagggtgcttgtgagcagatgaatccaatgattgatgacaagctg
gaagacattgacaggcaacactctgagctgtctgagctgaatgtgaaggtgctggaggcc
ttggagctctataacaaactgatgaacgaggcaccattctacacagcctactccaaactg
cagtcccagcagcagccccactacgcacctgcctctcaactccccatgcagggataccca
ggtcaggctggtggttcctacatgcctccagggatgccacagggacccccaggccagcag
gcctacatgagctctgaccaacccggaccactccagtcgctcccccctaacgtcacatct
cccaatggtcagccagcacagcttccttacagttctccatatgcacctgccggttaccca
ccacagatgggtgtagccccacagatggacatgtcggcctatcagaactccaacctgcca
ccagcctcctatcaaatggctgcttcatcgcaccagaccccacagcagcaacaggcctat
tatcagcagcctctcctgtaa
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