Oncorhynchus tshawytscha (Chinook salmon): 112238617
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Entry
112238617 CDS
T05605
Name
(RefSeq) nuclear receptor coactivator 2 isoform X1
KO
K11255
nuclear receptor coactivator 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112238617
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
112238617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
SRC-1
Nuc_rec_co-act
DUF4927
NCOA_u2
PAS
PAS_3
PAS_9
HLH
TFIIIC_delta
PAS_4
Motif
Other DBs
NCBI-GeneID:
112238617
NCBI-ProteinID:
XP_042164334
LinkDB
All DBs
Position
LG29:complement(33948564..34122162)
Genome browser
AA seq
1553 aa
AA seq
DB search
MSGVGENPSNPAARAESRKRKECSSDLLGPSPKQSIEKRNREHENKYIEELAELIFANFN
DIDNFNVKPDKCAILKETVKQIRQIKEQEKAAAANEEEVQKADVSSTGQSIIDKDALGPM
MLEALDGFFFVVNMEGNIVFVSENVTQYLLYNQEELMNTSVYSVLHVGDHAEFIKNLLPK
SLVNGVPWSSEGPRRNSHTFNCRMLVNPHSDNRDETNDHEGQKQKYETMQCFAVSEPKSI
KEEAEDFQSCLICVARRMPMKERPVLPTHESFTTRQDLQGKITSLDTSLLRASMKPGWED
LVRRSIQRFHLQNDGEMSFAKRHQQEVLRHGQAFSPIYRFSLSDGTIVSAHTKSKLVRSP
ATNEPQLYMSLHLLQREQSVCGMGPGQDMGPGGQGQQGTVMGPGPKPMVPNPSMTPPTPG
TISGLVPQGQDTTISSNSTPFSLPHGGPGSREPGLGPMGSGSGHMQGYRYGCPPQPMGYP
GGMQGGMGMNPPNHPHQQGASWRMSSPSRGSPTPAGGPHLGQQNSMLSPRHRASPGMAGS
PRVAPCLHSPSPVGMCGSGTGVAVGSSGPAANSHANSQANSLANSYTSSSLSALQALSEC
HGVGHGGCVHPHIHGAGGHSHAHTLGSPDRKMMGSPAGVTMGAGVNPHMMSKLGGGTNVD
PHGEQGGQYDQRQMDRQTDGNGSSGNHGDVKEERDGSNDGPNAQSRVLHDNKGHTKLLQL
LTTKSEPLDTPPSPNGGGDPKDPSSGLGGPHGPGAPGGHATSLKEKHKILHRLLQNSTSP
VDLAKLTAEATGKELGEQGSNVNTQVGTGGGTDGNLPSKQEPLSPKKKDNALLRYLLDEE
EGGMKERQARMEGGGEVKTEMKHPLHVKTEKQDAGYDRSEQSSELDGILDELQCVQPQLF
GEPRPVSLPSSLDKQTIINDILHITQETSPANAMATQQRGMGPGNYGGARGPEGQGPARG
LPVRSVSLDMTVSGVPQGQYPPVGTLSPYTLLQQQQGILANHTAMMSNQANLSGQMDGPR
QGMQQEGGWGPGGPGQSGSSSVRPPGVPGQQGTTLGRMGPSPGGTMRPNSLPGPGPRQML
QSQMMVNDMGMGPHQFSQQQAPPNQTAPWPDSVMPVEQTPFNQNRSLYASQQQQQQEVLC
VIPGPSGQSQGPGDGGGSDEGALLSQLYTVLKDFDGLEEIDRALGIPTLMGQGQSVDQDQ
FSSDPSMLLDQKPPVYSQQDLPPGSHLAQRGYHGPGTGRPMQDPTPGSLLSQRGYHDPGS
GRPMQDPTGQGFHPMAVQMGPRPGYPIMRLRPQAVVPNQPNTLRLQLQHRLQVQQNRQPM
MNQMSGVSNMNPTLQSNNPNQGTINAQMLAQRQRELLNNHLRQRQLEHQRQQQQQQRNMV
MRTQGLNLPPNIAAAAAASGLSGGLSNPRIPQTTNPQQFPYPPSYGMSQQPDGGFGGQAT
PQSPLLSPRMAHAQSPMMQQQGNANFQASPDLNGWPPQGNMGGNSMFSTQQSPPQFTQQQ
QTNGGAAMYNGNGMNLNVSMATNASGMAPVGQMAGQMITSPGMTSMGQEQKYC
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgttggtgaaaacccctcgaaccctgctgccagggccgagtcgcggaaacgc
aaggaatgttcctctgacctgttgggtcccagccccaaacaaagcatcgagaagagaaac
cgcgagcatgaaaacaagtacattgaggagctggccgagctgatcttcgctaacttcaac
gacatcgataacttcaacgtcaaaccagacaaatgtgctatcctcaaggagactgtcaaa
cagatacgacagatcaaggagcaagagaaagcagccgcggccaatgaggaggaggtacag
aaggcagatgtgtcgtcgacgggccaaagcatcatcgacaaggatgctctcgggccaatg
atgttggaggccctggatgggttcttcttcgtggtgaacatggaggggaacattgtgttt
gtgtctgagaacgtgacccagtacctgctgtataaccaggaggagctgatgaacaccagt
gtctacagcgtcttgcacgtaggagaccacgctgagttcatcaagaacctgctgcccaag
agcctggtgaacggtgtgccgtggtccagtgaaggtcccaggaggaacagtcacacgttt
aactgtcgaatgctggtcaaccctcacagtgacaacagggacgagaccaacgaccatgag
gggcagaaacagaaatatgagaccatgcagtgtttcgctgtctccgaacccaagagcatc
aaggaggaggcagaagacttccagtcatgtctgatatgtgtggctcgcaggatgcccatg
aaggagcggcccgttctccccacgcacgagagcttcaccacccgccaggacctgcaaggt
aagatcacgtcactagacaccagtcttctgagagcctctatgaagcctggctgggaagac
ctggtgaggagaagcatccagaggtttcacctacagaacgacggagagatgtccttcgcc
aagagacaccaacaagaggtgttgcgtcacggccaggcattcagccccatctacaggttc
tctctgtcagacgggaccatcgtgtcggctcacaccaagagcaagctggtccgctcccct
gccaccaacgaacctcagctctacatgtctctacacctgctacagagagagcagtcagtg
tgtggtatggggccgggtcaggacatggggcccggtggacagggccagcaggggacagtg
atgggccccggccccaaaccaatggtccccaacccctcaatgacacctccaaccccgggg
acaatatctggcctggtgccccagggacaggacaccacgatcagctccaacagcacgcca
ttctcccttcctcatggaggtccagggtccagagaaccagggctcggacccatggggtcc
gggtctggacacatgcagggctaccgctacggttgccctccccagcccatgggctaccct
ggagggatgcagggcggcatgggcatgaacccccccaaccatccccaccagcaaggggcc
agctggaggatgagcagcccgtctcgaggcagccctaccccagctggaggcccccatctg
gggcaacagaactcgatgctgtcccctaggcaccgggcgagtccagggatggcagggagc
cctcgcgtggccccatgcctgcactcgccctcccctgtggggatgtgtgggtctggaaca
ggggttgcagtaggaagtagcggtcctgcggctaacagtcatgctaacagtcaggctaac
agtcttgctaacagctacaccagtagttctctgtcggccctgcaggccctgagtgagtgt
cacggggtcggacatggcggttgcgttcacccacacattcatggcgctgggggtcattcg
cacgcacacaccctggggtcaccggacaggaagatgatggggtcgccagccggagtcacg
atgggggcaggggtcaaccctcacatgatgtcgaagcttggcggtggcactaacgtggat
cctcacggagagcagggtggacagtacgaccagagacagatggacagacagactgacggg
aacggtagcagcggtaaccacggtgacgtcaaagaggagagggacggctcaaacgacggc
cccaacgcgcagagccgtgtcctccacgacaacaagggccacaccaaactactccagctc
ctcaccaccaagtccgaacccctcgacacccccccgtctcccaacggaggaggagacccc
aaggacccctcgtcagggctggggggccctcatggtccaggggccccagggggccacgcc
acatccctaaaggagaaacacaaaattctccacaggctgctccagaacagcacctctcct
gtcgacctggccaagctcaccgctgaggccactggcaaggagctgggagagcaggggagt
aacgtcaacacccaggtgggtacaggagggggtacagatgggaacctcccctccaaacag
gagcccctgagtcctaagaagaaggacaacgcactgctgaggtacctgctggatgaagag
gaggggggcatgaaggagaggcaggctaggatggagggaggaggagaggtgaagacggag
atgaaacaccccctccatgtgaagactgagaaacaggatgcaggatatgatcgctctgag
cagtcgtctgagctggatggtatcctagatgagctgcagtgtgtccagccccagctgttc
ggtgagcctcggcccgtctctctgccttcctccctggacaaacagaccatcatcaacgac
atactgcacatcacccaggaaaccagccctgccaacgccatggcaacgcagcagaggggc
atggggccaggcaactatggcggtgccagagggccggagggccaggggccagctaggggc
ctccctgtgaggagcgtatccctggacatgaccgtgtcaggggtcccccagggccagtat
ccccctgtgggaaccctcagtccctacacgctcctacaacagcagcaaggaattctggca
aaccacaccgccatgatgtctaaccaggccaacctctcaggtcagatggatggtcctcgg
cagggcatgcagcaggaggggggttggggtcctgggggcccaggtcagagcgggtcatca
tcggtccgtcctccaggggttccaggtcagcaggggacgacgctcggccgtatggggccc
agccctggaggcactatgagacccaacagtctgcccggccctggacccagacagatgctg
cagtctcagatgatggtcaacgacatgggtatggggccccaccagttctcccagcaacag
gctccacccaatcagacggctccgtggccagacagcgtgatgcctgttgagcagaccccc
ttcaaccagaacaggtctctgtatgcctctcagcaacagcagcagcaggaggtgttgtgt
gtgattccggggcccagtggtcagagtcaggggcctggtgatggaggtggtagtgatgag
ggggcactcctatcccagctctacaccgtgttaaaggactttgatggcctggaggagata
gacagagccctggggataccgactctgatgggacagggtcagtctgtagatcaggatcag
ttctcttcagacccgtccatgttgttggaccagaagcctccagtgtacagccagcaggac
ctgccacctggctcccatctagcccagagagggtaccacggccctgggaccggcagaccc
atgcaggaccccacacctggctcccttctatcccagagaggataccacgaccctgggtct
ggcagacccatgcaggaccccacagggcaaggcttccaccccatggctgtccagatgggc
cccagaccaggataccccatcatgaggctgaggccccaggcagtggttcctaaccagcct
aatacactgaggttacagctgcagcaccggctacaggtacaacagaaccgccagccaatg
atgaaccagatgagtggagtgtccaatatgaacccaactttacagtccaacaaccccaac
caggggaccatcaatgcacagatgttggcacaacggcagagagaactcctcaacaaccac
ctgcggcaacgccagctggagcatcagagacagcagcagcagcagcagaggaacatggtg
atgagaacccagggactcaacctacctcccaatatcgccgcggcggctgctgcaagtggc
ctatcaggaggcctgagtaaccctcggatcccacagaccaccaatccccagcagttcccc
tacccacccagctacggtatgtcccagcagcctgacggagggtttgggggtcaggccacg
ccccagagtcccctgttgtcccccaggatggcccacgcccaatcccccatgatgcagcag
cagggcaacgccaatttccaggcgtcgcctgacctaaacggttggccgccccaggggaac
atgggaggaaacagtatgttcagtactcagcagtctccgcctcagttcacccagcagcag
cagaccaacggtggtgcggccatgtacaacggcaacggaatgaacctcaacgtctccatg
gctaccaacgccagcggcatggcccccgtgggtcagatggccggacagatgatcacctcg
cctggaatgacctcaatgggacaggaacagaaatactgctga
DBGET
integrated database retrieval system
