Oncorhynchus tshawytscha (Chinook salmon): 112238697
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Entry
112238697 CDS
T05605
Name
(RefSeq) CCN family member 2
KO
K06827
connective tissue growth factor (insulin-like growth factor-binding protein 8)
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
112238697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112238697
Membrane trafficking [BR:
otw04131
]
Endocytosis
Others
Insulin-like growth factor-binding proteins
112238697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_CCN
IGFBP
Cys_knot
VWC
TSP_1
Motif
Other DBs
NCBI-GeneID:
112238697
NCBI-ProteinID:
XP_042151065
LinkDB
All DBs
Position
LG13:9023899..9030688
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AA seq
347 aa
AA seq
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MSEGVITRMGLLLLIISSTMAQDCSDPCDCPSDPPPCPFGTSLVLDGCGCCKVCARQAGE
PCTVLEPCDHHKELYCDYAMLSDTEHGICMSQEGQTCDLGGVIYRSGETFQPSCKHQCVC
MNGEIGCVPTCANNVLLASPDCPYPRRIQIPGKCCEEWVCDQSPQDHPYQSAMAVYRKES
AHVPVPVESPRENCIVQTTKWGECSATCGMGVSSRVTNDNERCQLERQTRVCMIRPCHVE
QEKDIKRGKKCVRTPKSPRGVRFQLSGCSSRRVYKPKFCGVCTDGRCCTPHTTVTAEVEF
HCPEGDAFRRKMMFVKTCSCHHDCPRDNDIFLASHTRRMIGDYDNDM
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagggagttatcaccagaatgggtcttcttctgctcatcatcagctcgacaatg
gcccaggactgttccgatccctgtgactgcccatcggatccccctccatgcccgtttggt
accagcctggttctggatggctgtggttgctgcaaggtgtgtgccaggcaagccggcgag
ccctgtaccgtcctggagccatgtgaccaccacaaagagctttactgtgattatgcaatg
ctgagtgacaccgagcacggcatctgcatgtcccaggaaggccagacgtgtgacctggga
ggggtcatctaccgcagtggagagacctttcagcccagctgcaagcaccagtgtgtttgt
atgaacggagagatcggctgcgtgccaacctgtgccaacaacgtgctgctggcctctcca
gactgcccgtacccacgccgcatccagatccctgggaagtgctgtgaggagtgggtgtgt
gaccagagtcctcaggaccacccctaccagtcagccatggctgtctacagaaaggagtcg
gcccacgtgccggtcccggtggagagccccagggagaactgcatcgtccagaccaccaaa
tggggcgagtgctcggccacttgcggcatgggcgtgtcgtcccgcgtcaccaacgacaac
gagcggtgccagctggagaggcagacccgtgtctgtatgatccggccctgccacgtggag
caagagaaggacatcaagagggggaagaagtgtgtacggacccccaagtccccgcgaggc
gtgcgtttccagctgtcaggctgcagcagcaggagggtctacaagcccaagttctgtggt
gtgtgtacagacgggcgctgctgcaccccccacaccaccgtcaccgcagaggtggagttc
cactgtcccgagggagacgccttcagacgcaagatgatgttcgtcaagacgtgctcctgt
caccacgactgtccccgagacaatgacatcttcctggcttcgcacacacgcaggatgatc
ggggactatgacaacgatatgtaa
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