Oncorhynchus tshawytscha (Chinook salmon): 112238722
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Entry
112238722 CDS
T05605
Name
(RefSeq) uncharacterized protein LOC112238722 isoform X1
KO
K20686
Rho guanine nucleotide exchange factor 9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112238722
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112238722
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
SH3_1
SH3_9
PH
Motif
Other DBs
NCBI-GeneID:
112238722
NCBI-ProteinID:
XP_042181939
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Position
LG08:complement(78523470..78605974)
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AA seq
1136 aa
AA seq
DB search
MEHMDSPASHSNDSNGFLNKVFNVSLDVQNETGTVSIQETGKGEGHGEGPGPGQAQREWQ
ETGDRQADIQAPPQTPGKERPEVNRRTRATGGIWKILTRRRVASELDNRRPHSMILPGEE
AFIPKLSFADKVRSIKKLRSPGVFKGRVGKMSGSSTKFRDGETEDDSFCRDFLPSPGLHH
CRGTLRHRAKRHSYAGHTAEFDCSFEDMDLTATLDRHHLHSLVEPLTQNGSKPTERISCS
KRPQVQAQANHSSNCNSTSAGVCEEQSVRDSPKVPLGGRRSKRADVWSYLRRISVLGKGN
PAYSERSFDSELHTLDKTMDSDYGSVDFESVRDFQPAAPKHSDSKGGHFGGLIKFFSNFA
ETARKWRTSSRSFSPPEEGGERSLLGSPRAGQHLGDYVHSVSLTLRSEDHPECPPTPASP
LTPHSPRSPACDPASPPPLIGRRSPQVRLKAWRVSRDSSSVNGLVCVTSLETDRQMDRQT
ERQTRHTSVATVENHEPHSRLERETQKERETDVDRDPLECLSTVEERESGEGGEGHSGNY
LDSKDALTVSEQTHLPNGQSELREGEFVATREPAGNCYLEVFKALSRPLGAPPLEPPLRV
SLQRCRSLPLPPSTLTTLALFRGHTADSQSSSVCLGVGEAGSCRRRLLRTGSGPLQVNIL
ISGGSIVSAEAVWDHVTMADRELAFKAGDVIKVLDASNKDWWWGQIDEEEGWFPASFVRL
WVNQEDGGVEPVEGTSEMANGHLDPTNDCLCLGSPLQNRDQMRANVINEIMSTERHYIKH
LKDICEGYLRQCRKRVDMFNDDQLRVIFGNIEDIYRFQMGFVRDLEKQYNNEEPHLSEIG
PCFLEHQDGFWIYSEYCNNHLDACMELSKLMRDGRYQHFFEACRLLQQMINIAIDGFLLT
PVQKICKYPLQLAELLKYTAQEHSDYRYVAAALAVMRNVTQQINERKRRLENIDKIAQWQ
ASVLDWEGDDILDRSSELIYTGEMSWIYQPYGRSQQRVFFLFDHQLVLCKKDLIRRDILY
YKGRIDMDRYDVRDAIDGRDDDFNVSVKNAFKLHNKDSEELHIFLSKKQEEKMRWLRAFH
EERKMVQEDEKIGFEISEYQKRQAALTVRKVSKQKGVNRCVPPPTPSPGPPTPGTV
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggaacacatggacagccccgcctcccacagcaacgactccaacgggttcctcaataaa
gtcttcaacgtgtctctggatgtgcagaatgaaactggcaccgtatctatccaggagact
gggaagggagagggtcatggagaaggtccggggccaggccaagcccagagagagtggcag
gagactggggatagacaggcagacatccaggcaccccctcagacacctggaaaggagcgc
ccggaggtcaaccgtagaacaagagcgactgggggcatctggaagatcttgacccggcgt
agagtggcctcagagctggataacagaagacctcactccatgatcctccctggagaggag
gccttcatccctaaactgtcctttgctgacaaggtccgctccatcaagaagctccgctct
ccgggtgtcttcaaggggagggtgggtaagatgtctgggtccagcactaagttcagagat
ggagagacggaggacgactcgttctgccgggacttcctcccctcgcccggcctgcaccac
tgtaggggcacactccgccaccgtgcaaagaggcattcatatgccggacacaccgccgag
ttcgactgctcatttgaggacatggatctgacagctaccctggacagacaccatcttcac
tcactagtggagcctcttacccagaacggctctaagcccacagagagaatctcctgctcc
aagagacctcaggtccaggcgcaggccaaccactcctctaactgtaacagtacctcagca
ggagtgtgtgaggagcagagtgtgagggacagccccaaggtcccgctgggtgggaggaga
tctaagagagctgacgtgtggagttacctgaggaggatctctgtcctggggaaggggaac
ccggcctactcagagaggagttttgactcagagctccacacactggacaagaccatggac
tctgactacggctcggtggacttcgagagcgtcagggactttcaaccagcggctccaaag
cactctgacagcaaaggcggacattttgggggtctgattaagttcttcagcaactttgcg
gagacggctagaaaatggcggacgtcttctcgctccttctctcctccagaggagggaggg
gagcggtcgctgctgggctcccccagagcagggcagcatctgggggactacgtccacagt
gtgtccctgaccctccgcagtgaggaccacccagagtgtcccccaacacccgcctcaccc
ctgacccctcactcccctcgctcccctgcctgtgaccctgcctcaccccctcctctaata
ggcagacggtctcctcaggtgaggctgaaggcctggagagtgagtcgggactcatcaagc
gttaacggcctggtgtgtgtgacctcattggagacggacagacagatggacagacagaca
gagagacagacacggcatacgtctgtagccacagtagagaatcacgagccacactcaagg
ctggagagagagactcagaaagagagagagacagatgtagacagagatcctttagaatgt
ctgtctacagtggaagagagagaaagcggggagggaggagagggacactcaggaaattac
ctggattccaaggatgctctaactgtctcggagcagacacaccttccaaatggccaatca
gagttacgggaaggagagttcgtagccactagggaaccagcaggaaactgctacctagaa
gtatttaaggccctgtctcgtcccctgggggcgccacctttagagccccccctcagagtg
tctcttcagaggtgtcgctccctccctctcccccccagcaccctcaccactctggccctg
ttccggggacacacagcagactcccagtcatcctcagtgtgtcttggtgttggagaggct
ggcagctgcaggaggagactgctcagaacaggctctggtccactacaagtcaacatcttg
ataagtggaggatctatcgtcagcgctgaggcagtatgggaccatgtgaccatggccgac
cgagagttggcgtttaaggccggtgatgtcatcaaggtgctggacgcgtccaataaggac
tggtggtggggtcagatcgacgaggaggagggctggttccccgccagcttcgtacggctg
tgggtgaaccaggaggatgggggggtggagcctgtggaggggaccagtgaaatggctaac
ggtcacctggatccgaccaacgactgcctgtgcctgggctcgccgcttcagaaccgtgat
cagatgagagccaacgtcatcaatgagattatgagcacagagagacactacatcaaacac
ctcaaggacatctgtgagggctacctgcgtcagtgtaggaagagggtagacatgtttaac
gatgaccagctgagggtgatctttgggaacatcgaggacatctaccgtttccagatgggc
ttcgttagagacctggagaaacaatacaacaacgaggaaccacacctgtctgagatagga
ccctgctttctagaacatcaagatggcttctggatctactctgagtactgtaacaaccac
ctggacgcctgcatggagctgtccaagctgatgagagacgggaggtaccagcacttcttc
gaggcctgtcgtctgctgcagcagatgatcaacatcgctatcgacggcttcctcctcaca
cccgtacagaagatttgcaaataccctctgcagctggccgagctgctcaaatacaccgca
caggaacacagtgactatcgctacgtggcggcggcgctggcggtgatgcgtaacgtcact
cagcagatcaacgagaggaagaggaggctggagaacattgacaagatcgcccaatggcag
gcctccgtcctggactgggagggtgatgacatcctggaccggagctcggagttgatctat
acaggagaaatgtcttggatctaccagccctatggacgcagtcagcaacgggtcttcttc
ctctttgatcaccagctggtcctctgtaagaaggacctgattcgtagggacatcctgtac
tataagggccgtatcgacatggaccgctatgacgtgcgggacgccatcgacggacgtgat
gacgacttcaacgtgagcgtgaagaacgcgttcaaattgcacaacaaagacagcgaggag
ctccacatcttcctgtccaagaaacaggaggagaagatgcgatggctccgggctttccac
gaggagagaaagatggtgcaggaggatgagaaaatcgggtttgagatctcagagtaccag
aagcgtcaggcagctctgactgtgaggaaggtatctaaacagaaaggtgtgaacagatgc
gtgccccctcctaccccctccccaggaccccctacccctgggacagtatga
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