Oncorhynchus tshawytscha (Chinook salmon): 112238735
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Entry
112238735 CDS
T05605
Name
(RefSeq) AT-rich interactive domain-containing protein 5B-like
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112238735
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
ARID
112238735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
112238735
NCBI-ProteinID:
XP_042171810
LinkDB
All DBs
Position
Unknown
AA seq
1417 aa
AA seq
DB search
MEPNSLTWVGSPCGFHGPYIFYKAFRFDIEANPRILSVGDFFLVRCRPGEPLCIAELQLL
WEERSRKLLLSSSKLYFLPEDTPQGRTVSHGEDEVLAASEKVVVKLQDLVRWTVWDSSGW
SRGLKAAPLKPSEVLQELEKNGQRDAPVLHRYRESILNSGLNIKDVLKDKTLLGDDGDQK
RVSVLSYPQYCRYRSLLARLKERSASVLTSQVVLALGGVTSLTDHTHILYCRDTFEHPTL
IDNDNVCDEFAPNLKGRPRKKKLSVSQRCDSQNTTAGKEKCNTEGKAPAKVKPESKAVLS
RWPKGISRGSSCCKRVSPKGRTGGGSEECPPDEQAFLVALYKYMKERRTPIERIPYLGFK
QINLWNMFQVAETLGGYELITSRRQWKHVYDELGGNPGSTSAATCTRRHYERLILPYERF
TKGEEDKPLPLSKPRKDLTTQQEVPKTKVPTVTQCPKEEQHPQNSQPPRTEQDPCAKDLE
LSPECEEKESSLEEEGVKVKQVVPLPAGEVSRSTSEEEEPVAVCIKERVLHQGVSWENNE
KPPSDTTTLHFFPVDTPTPINHSHPQDQWQKELPDYANPCPQARLDQSGLTEEPQGPKPG
IVGVVLPIRQRSLQSPRAPEDTTDRAQLPGQDHSCYRYSTILYPGRAHPGPGNNHPGTNP
GINHPGTNHPGINSGTNHPGTNHPGTNHRGTNHPGTNHPGINHPGTNHPGINHPGTNHPG
TNHPGTNHPGINHPGTNHPGINHPGTNHPGTNPGTNSGTNHPGTMSDLAKKKLLSQVNGT
APGPSLPNHYAIGPPPPLINTSLAIGNAEESASQPIAGCQGSCSTDTAVVKRPSVIQHAQ
SFKPLFCETGDRREREGLNRNMYKPGEPYSPCDLTQHHPLSHPPPQTRHHPQPHPNSPCD
LTQHHPLSHPPPDYTLSPIPSTPRLDTIPSPTLTLPPHPNFLYDLTQPHPNSPCDLTQPH
PNSPCDLTQPHSNSPCDLTQTLPDLTQPHPNFPYDLTQPHPNSRYDLTQPHPNSTYDLYL
RRLLPLHPQNLHSLYNHTETHVSQFISSRERETALPRDCEAAPRFPSKHPNTMGLGGYCA
RINPMTPTLTPHTLRDKTSLVQTSSEDQPTDLSLPKSSPHKPTPSTATPSLHNNPHPLMP
LQDTGRFCRVPPMTMSSSPRQPADPQPNPRGKTLNGQRGGWEDQGLGHKMEELNRPILGT
KNTSRPQNNVCTARPLKRSLEERENGPPERKIRAVTPMHSSSSSSSCTIRDRDRECYSEW
KVSTPAMEGVVPADPQPAPAHSLHLHINSFVEGHKFPFHSSPLFPGGLYPEAFISQIQDM
CEGLGPHRPLGYHPLQYLKNQAGLSPLVPPFAFHSFMMQRQAHSPAHMYRHPMGASYGEL
LHHGLHPMSSMSALNTQQHPDISPSQLSSVNPNTKLS
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaactcactcacgtgggtcggctcaccttgcggttttcacggaccttacatt
ttctacaaggcttttaggtttgacattgaagccaatcctcggatcctgtctgtgggagac
tttttcctagtgaggtgtagacccggggaaccgctctgcatagcggagctacagctgtta
tgggaagaaagaagcagaaaactacttttatccagctccaaactttattttctccccgaa
gacacccctcagggacggactgtcagtcacggagaggatgaggtcctggctgcgtctgag
aaggtggtggtgaagttacaggacctggtcagatggactgtatgggactcttcaggttgg
agcaggggcctgaaggctgcacctctaaagcccagtgaggtgctccaagagctggagaag
aatggacagagagacgcccccgtcctccaccggtacagagagtcaatactcaacagcggc
ctcaacatcaaagacgttttaaaggacaagactctactaggtgatgacggggaccagaag
cgtgtgtcggtgctgtcttacccccagtattgtcgctaccgttccctattggccaggctg
aaagaaagatccgcctccgtcctcacctcacaggtggttctggccctggggggcgtgacc
tcactcacagaccacacccacatcctgtactgcagggacacctttgaacaccccaccctc
atcgacaacgacaatgtctgtgatgagttcgctcccaacctgaagggccggcctcggaaa
aagaagctatctgtctcgcaacgctgcgactcccagaatacaacagcaggcaaggagaag
tgcaacacagagggcaaggcccctgccaaggtgaagcctgagtccaaggcagtgctgtcc
aggtggcctaaaggaatcagtagaggcagcagctgctgtaagagggtctcccctaaagga
agaacagggggaggaagtgaggagtgtcctcctgatgaacaggccttcctagtagctctg
tataaatacatgaaggagaggaggacgcccatagagaggatcccctacctgggcttcaaa
cagataaacctttggaacatgtttcaagtagcagagacccttggaggatatgagctgatc
acatcgcgccgacagtggaaacatgtttatgacgagttaggaggaaacccaggaagcacc
agcgctgcaacctgcaccagacgacactatgaaaggcttatcctgccctatgagaggttc
actaaaggagaggaagataagcccctccccctatccaaaccccgtaaagacctcaccacc
cagcaggaggtccccaagaccaaggttcccacggtgacgcagtgccccaaagaggagcaa
cacccacaaaactcccaaccccccaggactgaacaggacccctgtgctaaagacctggaa
ctctcaccagagtgtgaggagaaggaaagtagtctggaggaggagggagtcaaggtgaag
caggtggtgcccctgccggctggtgaggtgagcaggagcaccagtgaggaggaggagcca
gtagcggtctgcatcaaggagagggttctacaccaaggagtttcctgggagaacaacgag
aagccaccttcagacaccactacactccacttcttccctgtagacactcccactccaata
aaccactcccaccctcaggaccaatggcaaaaggagctgcccgactatgccaacccatgt
ccccaggccaggctggaccagtctgggttgactgaggagccccagggccctaaacctggc
atagtgggggtggtgctccccattcggcagaggtccctacagtcccccagggctccagag
gacaccacagacagagcacagctccctggacaggaccactcctgttacagatactctact
atactctacccaggcagagcccatcctggacctggcaacaaccatccaggcaccaaccct
ggcatcaaccatccaggcaccaaccatccaggcatcaactctggcaccaaccatccaggc
accaaccatccaggcaccaaccatcgaggcaccaaccatccaggcaccaaccatccaggc
ataaaccatccaggcaccaaccatccaggcatcaaccatccaggcaccaaccatccaggc
accaaccatccaggcaccaaccatccaggcataaaccatccaggcaccaaccatccaggc
ataaaccatccaggcaccaaccatcctggcaccaaccctggcaccaactctggcaccaac
cacccaggcaccatgtctgatctagccaagaagaagctactctctcaggtcaatgggacc
gcccctgggccatctctgcccaatcactacgccattggcccgcccccacccctcatcaac
acaagcctggctattggcaacgcagaggagtcggccagtcagccaatagcaggctgtcag
ggttcctgcagcacagacacagctgtggtcaaacgtccgtctgtcatccagcatgcccag
agcttcaagccgctgttctgcgagacaggggacaggagggagagggagggcctgaacagg
aacatgtataaaccaggggaaccctactctccctgtgacctgacccagcaccatccccta
tcccatccacccccccagactagacaccatccccagccccaccctaactcaccctgtgac
ctgacccagcaccatcccctatcccacccacccccagactatacactatccccaatccca
tccacccccagactagacaccattcccagccccaccctaactctcccgccccaccctaac
tttctctatgacctgacccagccccaccctaactctccctgtgacctgacccagccccac
cctaactctccctgtgacctgacccagccccactctaactctccctgtgacctgacccag
actctccctgacctgacccagccccaccctaactttccctatgacctgacccagccccac
cctaactctcgctatgacctgacccagccccaccctaactctacctatgacctttaccta
cggagacttctccccctccacccccagaacctccacagtttgtacaaccatacagagact
cacgtcagccagttcatcagcagcagggagagggagacagccttacccagggactgtgag
gccgcgccgcggttcccctctaaacaccccaacacaatgggtctggggggctactgtgcc
cgtataaaccccatgacccccaccctgacccctcacacactaagagacaagacgtccctc
gtacagacaagctcagaagaccaacccacagacttaagtcttcccaagtcctctcctcac
aaacctaccccctccactgccacaccctcccttcacaacaacccccaccccctcatgccc
ctccaggatactgggaggttctgtagagtcccccccatgaccatgtcctccagccccaga
cagcctgcagacccccagcctaaccccagggggaagaccctgaatggccagagaggagga
tgggaagaccaggggctgggacacaagatggaggagctaaacagacccatcctaggcacc
aagaatacgtccagaccacagaacaacgtgtgcacggcgcgcccactgaagaggagtctg
gaggagcgggagaacgggcccccagagaggaagatcagagctgtcactcccatgcactcc
tcctcttcctcctcatcctgtacaatcagggacagagacagggagtgctactcggagtgg
aaggtcagtaccccagcgatggagggggtggtaccagccgacccccagccagccccggcc
cacagcctccacctacacatcaactccttcgtggaaggacacaagttccccttccactcc
tcccccctgttccccgggggcctctacccagaggccttcatctctcagatccaggatatg
tgtgagggcctgggcccccacaggcccctggggtaccaccccctacagtacctgaagaac
caggccggcctctctcctctggtcccgcccttcgctttccactccttcatgatgcaaaga
caggctcacagccccgcccacatgtaccggcaccctatgggagcctcgtatggggaactg
ttgcatcatggtctacaccccatgtcttccatgtctgccctcaacacacagcaacaccca
gacatcagcccctcacagctctcctctgtcaaccccaacaccaaactatcataa
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