Oncorhynchus tshawytscha (Chinook salmon): 112238794
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Entry
112238794 CDS
T05605
Name
(RefSeq) neurexin-3b-like
KO
K07377
neurexin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112238794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112238794
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
112238794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
Syndecan
EGF
Motif
Other DBs
NCBI-GeneID:
112238794
NCBI-ProteinID:
XP_042156468
LinkDB
All DBs
Position
LG18:complement(35859838..36308439)
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AA seq
1489 aa
AA seq
DB search
MDFLLCVNDMLFMETMNLFVGCGSIPSRVTISREENVATFRGSEYFCYDLSQNPIQSSSD
EITLSFKTWQRNGLLLHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNG
WHDIKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNF
MGCLKEVVYKNNDIRLELSRLARIVDPKMKLQGEVVFKCENVPTLDPINFESPDSYLSLP
KWNTKRVGSISFDFRTSEPNGLILFTHGKAQDRRDAVGKKNNKVDFFAVELLDGGLYLLL
DMGSGTIKVKATQSKVNDGAWHHVDIQRDGRSGIISVDSRRTPFTASGENEILDLEGDLY
LGGLPDNRVGLVLPTELWTAMLNYGYVGCIRDLFIDGRSKNIRAISESQNTTGIRPTCSK
VTGKQCDSNHCKNNGVCKEGWNRFICDCTGTGFWATTCEREASILSYDGSMYMKVVMPAV
MHTEAEDVSLRFMSQRAFGLLMAATSRDSADTLRLELDSGRVKLTVNLDCVRINCNTSKG
PETLYAGQKLNDNDWHSVRVVRRGKNFKLTVDEDMSEGQMAGDHTRLEFHNVETGILTEK
RFISSSPSSFIGHLQGLKFNGMFYIDMCKNGDIDFCELNARFGMRSIIADPVTFKSKGSY
LGLATLQAYTTMHLFFQFKTTSPDGFILFNSGDGNDFIAVELVKGFVHYVFDLGNGPSLL
KGNNERALNDNQWHNVVITRDATNTHTLKVDAKSVTQNINGAKNLDLKGDLFVAGLGPNM
YQNLPKLVVSREGFQGCLASVDLNGRLPDLINDALFRSGQIERGCDVDFTKADLQGPSTT
CQEDSCTNMGVCIQQWENFTCDCTMTSYTGTQCNDPGTTYIFGKGGGLITYTWPNNERPS
TRTDRLAVGFSTTIKDGILVRIDSAPRLGDYIMLHITEGKVGVTFNIGTVDISVKELNTA
INDGKYHLVRFTRNGGNATLQVDNWPINEHFPAGPSDVERYQMGNKKIPFNYKRPVEDWL
QEKGRQLTIFNTQAAISIGGNDRKRPYQGQLSGLYYNGLKVLNMAAEGHANIKVNGSVRL
VGDMPTSRGAARTTTSVPPEMSTTFIETTTTLSTTTTRKQRSPPTIQTTDDIVSSAECSS
DDEDLEECDSGHAGGELVIPVLVEDPIDIPPVSPRSPFIPLPPTLHPVLPTLRPVLTIIE
TTKSSLPMATEVGLPCLSDRDSDECDDGLDGDGGDYDGMVISGFGSGEAFDSSLPPTDDE
DFYTTFSLVTDKILTTSAYEGGYKALAPKWEAKDLRPSKASEAGRTTPTPPLPNLGGTVA
EASLPSDGTLAKLPAGKMDNREVIKALQPDIVLLPLPTVSFDLDGTKPRGPLITSPMLRT
VPAALPTAPVVRRVPPGASEVIRESSSTTGMVVGIVSAAALCILILLYAMYKYRNRDEGS
YQVDETRNYISNSAQTNGTVVKDKAPSGGSGAKGSSGKRPKDKDKEYYV
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atggacttcctgctttgtgtcaatgatatgcttttcatggagaccatgaatctctttgtg
ggttgtggttccattccttccagggtcaccatttcaagagaagagaacgtggcgacgttc
cgtggttctgagtacttctgctacgacctgtcccagaaccccatccagtcatccagtgat
gagatcacactctccttcaagacgtggcagaggaacggtctcttgctccacacagggaag
tctgctgactatgtcaacctggccctaaaggacggggcggtgagcctggtcatcaacctg
ggctccggggccttcgaggccattgtggagcccgtcaacgggaagttcaacgataatggc
tggcacgacatcaaggtcacacgcaacctcagacaggtgaccatctctgtggatgggatc
ctcaccacaacaggctatacccaggaagactacaccatgctggggtctgatgacttcttc
tacgtgggtgggagtcctagtacggctgacctacctggttctcctgtcagcaacaacttc
atgggctgtctgaaagaggtggtctataagaataatgacatccgtctggagctctcccgt
ctggctcgcatcgtagaccccaagatgaagctccagggtgaagtggtgtttaagtgtgaa
aacgtacccaccctggacccaatcaactttgagagccctgattcctacctcagcctgccc
aagtggaataccaagagggtcggctccatctccttcgatttcaggacctccgaacccaac
ggactcatcctcttcacccatggcaaggcccaggaccgtcgtgacgcggtagggaagaag
aacaacaaggtggacttctttgctgtggagctgctagatggagggctgtacctgctgctg
gacatgggctcgggaaccatcaaggtcaaagccacacagagcaaggtcaacgacggagcc
tggcaccacgtagacattcagagggacggacgatcaggcatcatctcagttgacagtcgg
aggacccccttcacagccagcggagaaaatgagatcttagacctggagggagacctctac
ctgggtggtctccctgacaaccgggtaggcctggtgttacctaccgaactgtggacggcc
atgttgaactacggctatgtgggctgcatcagggacctcttcatcgacggacgctccaaa
aacataagggccatctcagagtctcagaacaccacaggcatcaggcccacctgtagtaaa
gtgacagggaaacagtgtgacagtaatcactgtaagaacaacggagtctgtaaggaaggg
tggaaccgcttcatctgtgactgcaccgggactgggttctgggccaccacgtgtgagaga
gaggcgtctatcctgagctatgacggcagtatgtacatgaaggtggtgatgcctgccgtg
atgcacacagaggcagaggacgtctccctacgctttatgtcccagcgtgcatttgggctc
ctcatggccgctacctcccgggactctgccgacacgctccgtctggagctggacagcggc
cgtgtcaaactcacggtcaacctagactgtgtcaggataaactgtaacaccagcaaggga
ccagagactctatatgcgggacaaaagctcaatgataatgactggcactctgtcagagtg
gtccgacgcggtaaaaacttcaaactgacagtcgatgaagacatgtctgaaggccagatg
gcaggcgaccacacccgtctggagttccataatgtggagacaggcattctgacggagaag
cgtttcatctcgtcctccccctcctctttcattggacacctgcagggcctgaagttcaac
ggcatgttctacattgacatgtgtaagaatggagatattgacttctgtgagctcaacgcc
cgctttggcatgcgctccatcattgctgacccagtgaccttcaagtccaagggcagctat
ttggggcttgctaccctgcaggcctacaccaccatgcacctgttcttccagttcaagacc
acatcgccggacggattcatactgttcaacagtggagacgggaacgacttcattgctgtg
gagctggtcaaagggtttgtccactatgtgtttgatctgggtaacgggcccagtctactg
aaggggaacaatgagagagctctaaatgacaaccagtggcacaacgtagtcatcacgagg
gacgccaccaacacacacacactgaaggtggatgccaagtctgtcacacagaacatcaac
ggagccaagaacctagacctcaaaggggatctgtttgtggcaggtctggggcccaacatg
tatcagaaccttcctaagctggtggtctctagggagggtttccagggctgtctggcatct
gtcgatctcaacggccgtctacctgacctcatcaatgatgccctgttccgctcaggacag
atcgaacgcggctgtgacgttgatttcaccaaagccgacctgcaaggacccagcaccacc
tgtcaggaggactcctgtaccaacatgggcgtgtgtattcaacagtgggagaactttacc
tgcgactgcacaatgacctcttacacagggacacagtgcaacgaccctggtaccacctat
atcttcggtaagggcgggggtctgatcacgtatacgtggcctaacaacgagagacccagc
acgcgtactgaccgtctggctgtgggcttcagcaccaccatcaaggatggaatcctggtt
cgcatcgacagcgctccacgactaggggactacatcatgctacacatcacggaaggcaag
gtgggcgtgacgttcaacatcggcacggtggacatcagtgtgaaggagttaaacactgcg
atcaatgacgggaaatatcacctggttcgattcacaaggaatggggggaacgccaccctg
caggtggacaactggccaatcaacgaacacttccccgcaggaccaagcgacgttgagcgc
tatcaaatgggtaataagaaaatcccattcaattataagaggccggtagaagattggctg
caggagaaaggccggcagctcaccatcttcaacacccaggcggccatctctataggtggt
aatgaccgtaaacgtccctaccagggccagctgtctggcctctactacaacggactaaag
gtcctcaacatggccgccgaaggtcacgccaacatcaaggtgaacgggagcgtccgattg
gtgggtgacatgcccaccagtaggggcgctgcccgcaccaccacctctgtgccacctgag
atgtccaccaccttcatagagaccactacgactctgtcaacgaccaccacgaggaaacag
cgctccccacccaccattcagacgacagatgacatagtatcgtcggcggagtgctccagc
gacgacgaggatctggaggagtgtgattccggacacgcaggaggggagttagtcatcccc
gtacttgtagaggatcccatagacatccctcctgtttccccccgttcccccttcatcccc
ctccccccaaccctccaccctgtcctcccaaccctccgccccgtcctcaccattatcgag
accacaaaatcgtccctgcccatggccactgaggtggggttaccttgcttgtcggaccga
gacagcgatgaatgtgatgatggtcttgatggtgatggtggtgattatgatggcatggtg
atttcggggtttggctctggcgaagctttcgactctagcctgccccccactgacgatgaa
gatttttacaccaccttctccctggtaacagataagatcttgaccacgtcggcctacgaa
ggtggctacaaagctctcgcgcccaagtgggaggccaaggacttgaggcctagtaaagcc
tcagaggcgggtaggactacacccaccccgcctctacccaacctagggggcactgtagca
gaggcgtccctcccatcagatggcacgctagccaaactgcccgccgggaaaatggacaac
cgcgaagtgatcaaagccctgcagccggacatagtccttcttcctctgcccactgtgtcc
ttcgacctggatggcaccaagcctcgtgggcccctcatcacctcacccatgctgcgtacg
gtgcctgccgcgttacccaccgcaccagtcgtgaggcgggtgcccccgggggcctctgag
gtgatacgagaatccagcagcacaacgggcatggtggttggcatcgtctcggccgcggca
ctctgcatcctcatcctcctctacgccatgtacaagtacaggaacagggacgaaggctcc
taccaggtagacgagacacggaattacatcagcaactcagcgcagaccaacggcaccgtg
gtgaaagacaaagcacccagcgggggcagtggcgccaagggatccagcggcaagagaccg
aaagacaaggacaaagaatactatgtataa
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integrated database retrieval system
