Oncorhynchus tshawytscha (Chinook salmon): 112238801
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Entry
112238801 CDS
T05605
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-2
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112238801
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112238801
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112238801
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCCH_9
zf-C3HC4
zf-RING_2
zf-RING_UBOX
APOBEC1
MKRN1_C
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
112238801
NCBI-ProteinID:
XP_042162046
LinkDB
All DBs
Position
LG25:complement(20857929..20888739)
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AA seq
435 aa
AA seq
DB search
MNTKQVTCRYFLHGVCREGNRCMFSHDLTTSKPSTICKFYQRGVCAYGDRCRYDHIKPAG
GGGGRGVPMDLPNRNPITAGAFIPSGVAVPGHPGNSAPPPRHNGGKKPLVLRDRAQGCDS
RMMPYGGDGPEVTEAECWAEYHENGAHAKPHSYLDAIRTSLECSATASPYPLPVSVPCPQ
QQLCPSAAAGQCHYGNTCPYLHGDLCDICRLQVLHPHDPEQRRAHEKMCMLVFEADMEKA
FAAQHSQDKVCSICMEVVYEKAAASERRFGILSSCCHTYCLSCIRQWRCAKQFENKIIKS
CPECRVVSEFVIPSVYWVEDQDEKNRLIEDFKSGVSKKPCKYFDQGRGTCPFGGKCFYMH
AYPDGTRAEPDKPRKQLGSEGNVRFLNSVRLWDFIEDREQRSVAQPQDEVSELRELFMQM
SGPGREESSGVSAQP
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgaagcaagtcacctgcaggtattttctccatggagtctgccgagaggggaat
aggtgcatgttctctcatgacctgaccaccagtaaaccttcaaccatctgtaagttctac
cagagaggtgtgtgtgcctacggagaccgctgcaggtatgaccacatcaagccggctggt
ggtggaggggggagaggtgtgcccatggacctccctaacagaaaccccatcactgctggg
gccttcattccctctggtgttgctgtcccgggacatccaggcaactctgcacccccaccc
aggcacaatggagggaagaaacccctggtgctgagagatagagcccagggctgtgacagc
agaatgatgccttatggtggagatggcccagaggtaactgaggcggagtgttgggcggaa
taccatgaaaacggcgcccatgccaaacctcattcctacctggacgccatcaggaccagt
ctggagtgttctgccacggctagcccctacccactccctgtgtctgtcccctgcccccag
caacagctctgtccctctgctgctgcaggacagtgtcactacggaaacacctgtccctat
ctccatggtgacctgtgtgacatttgcaggctgcaggtgctccacccacatgaccctgag
cagaggagagctcacgagaagatgtgtatgttggtgtttgaggcggacatggagaaggcg
tttgcagcgcagcacagccaggacaaggtgtgttctatctgtatggaggtggtttatgag
aaagctgctgcctcagagagacgcttcgggatcctctcttcctgctgccacacatactgc
ctctcctgcatccgccagtggcgctgcgccaagcagtttgagaacaagatcatcaagtcg
tgtccagagtgcagagtggtgtctgagtttgtcatccccagtgtgtactgggtggaggac
caggatgagaagaacagactgatagaggacttcaagtctggagtcagtaagaagccgtgt
aaatactttgaccagggccggggaacctgtccgtttggagggaagtgtttctacatgcat
gcttaccctgacggaacgcgggccgagccggacaaaccccgcaagcagctgggctctgag
gggaacgtgaggttcctgaactctgtgcgtctgtgggacttcattgaggatcgcgagcag
cgcagcgttgcccagccgcaagacgaggtcagcgaactgagagaactcttcatgcagatg
tctggtccaggaagggaggagagcagcggggtgtctgcccagccctga
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