Oncorhynchus tshawytscha (Chinook salmon): 112238807
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Entry
112238807 CDS
T05605
Symbol
si:ch211-220f16.2
Name
(RefSeq) golgin subfamily B member 1 isoform X1
KO
K20478
golgin subfamily B member 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112238807 (si:ch211-220f16.2)
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
112238807 (si:ch211-220f16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_13
Filament
Crescentin
Fez1
Sec10_N
ATG16
MinC_N
Motif
Other DBs
NCBI-GeneID:
112238807
NCBI-ProteinID:
XP_042174958
LinkDB
All DBs
Position
Unknown
AA seq
2852 aa
AA seq
DB search
MLKWFSNEDGAPGQGALGSPQGGGGAEGGEGGQAALVEVAERLAQTEQLVAQLKELIREK
DGSLRTKDEQLKAEKEACEAKLSKMRLQNKAKVTSLSAQLEELKKGGAAGGGAGGQGTPT
HSKKGGAEGSEQASRGKILLLRKKVEELEHQLSQRDEELEVKSRELEAQRQRGADMDAML
VERNRKLSEKEAYIVHLQTGMATGEQTATPPAQSDTEHMALPEESGAGSLAELQLLVLSL
TRKVGEGDERYSLLQEQTESLKELLVTEKAAFEDKENMYKQNIQTFKDIILQKDNKLMEV
NQMHEQELFKLAAKSDASADLEQLLKALKQKLHEKEEVLQGKNQVIDVLQGEVDSRDQQI
KDLVERARRLQVERESLGSKMEAEKHVMRAQLRDLLEKHQGELRRAAECHEAQLAEREQA
FRGQLQEELGRTPVAELQTQTQAGSGGDSPATAQRMNELEAQAKLKSEEASKSEAKFLKI
KAWSKSRIRQLEDELRKSQSGRVGPDVTSLRSRVTDLEEEREETLWKLEQYDEIKAKNDV
LEAKLVVYEEQQRKMASDLEQVTKRAASQASESGSADDAQSQVLDWQEMVSEAVTARDRA
REEKATMALRMSHMEEEREVLASRQQELEEELVQARGLTGLHRGGKKMGGAAHQHSLQED
FEFDGKQAFHQDPHSGGSESTTPMEEGENMGGWWPEYTSPNTGGLRSVVEELELERNQLQ
EQILGLEDRCQDLEDRLQLQARIESLQNESERLQGQLASLRSQQSRDAEKHHLLVTSLNE
QLKGLSDTQECLETSLIEKENTLVKTSEKLELIDSLRDSLMEKEAQHKEVADKLLQSENN
LTEVSTKCSTFEKQCSELKTSVADLTHKLSVLKEKTQKQEATINTLQNDLDQTNDDLDKL
NTTHLEERSQLIHNLQSCEREIDNLRDVLSDKDKEILALSGNMAEYAEQIMVLKQEIKHK
EEDLVRIETALTKTEREAQIIRDSQNSDQQALYTKTAELVEQLKDAETELSKAKEEKESR
TVEVEEQLKDAETELSKAKEEKESRTVEVEELRKQVEEDKRTILELRGEIQQHNVGHRNH
LLECETQISSLKEHVTVASQKLQESEGLISQLREASTSSKTLKDQLQDKEQTYEKELKSV
KEERNKLNAEVSKHNDDLKTLSNKLEKQTECQVQLKKEMQEKLETISSLEEKLRAIQEEA
EVEQQKFNTELQVRDSEKEKLAKDLQVKLENISNMKKLLKNMKTEKQQLQADLKEKADEL
KSQKQLVDELNKKSTAALELNSSLNSQKNGLREENQRLQQDVAGKQKSISEMTDERDSLR
NKVSDFETQHSENRKVIEGLLKDKEELSVRANELNRVLEQNKQSISESLFEKTNECSLLT
KTLREREETVARLQVQIDSLNTQVEQFHHNIAEKEKFVTDQNSQVEAQQSQLSQLQETMY
LLQEQETALKTGLTEKDTVLQQKSDECSSLQNKLGQQKKLLSKLQGETKSLKGQCSQLTQ
HLEEKEETFRQMTQDCENHKDELNQRNESMKSLSSQLGVINESSAKLESENTELKTTLEN
HTAENKKLREEMEQRQAEVVGLHSHIQALSEQNQQLRAAYEIRDQELAQQMHVASELDRR
VNVTLEQNTNLCSQLNSLTEEKQILQQELAVQSESISELSKEKNLLQDKLSNFEMQHSEN
CKIIEGLLKDKKELSVAVEELNKVLEQNKQTVSESLLDKTNKCTNLTKLLRGSEEALAHS
QDQVDSLNTQLDQLNNNITEKEKTIRNQNSQLEAQQRELSQLQETLALLQEQGTALKSGL
TEKDTMLQQKAEEWSSLQNKLNQLQGETKSLKGQCSQLTQHLEEKEETFRQMTQDCENHK
DELNQRNESMKSLSSQLGVMNESSAKLESENTELKTTLENHAAENKKLREEMEQRQTEIL
DLRDNIQALNEQNVRLKTELKNSVTEASKKLEEISVLKAEISNRDSYVSNLTKQLTAACS
DRDSLGLNLQQRGESLKQQEMFIKQLQTKSVEGEGQMSQAITELQTQAQSLQKSLQDKDV
SLHEAEKRLSLLREKFTLESEDFKTQLNSSAETMKQLQGDLRNAVEQSNQLSGRLEEQEA
QLKQKVDDYVSLRTYVSELEDSTTQLRGQVDSLTSESSLLKETLKEKVKFILEAQSTSSA
VSESLNSKLKTKDTECESLKEQLLYLQGSVVKLNTKDAECECLKEQLSHLQESVSKLNSS
LSAQSSEVARLQQALEERGTAVMDQSKALQELQRRADEAALFKTQFMESTELVSQLQDQI
QELSTKSASLSRSAEENQSAFVNLQEKYATHLEELQEARMMLSQRAEEMSSLNKSLSESN
STVQAAESTIEVLRNESSLLRQDLRQIQTLNVDLSKQKEDALATHQRSTSTFTVEIERLK
SQYLHVAAQVNALTENLEQREMSLHAINSQYTAQVKQAEHVVSEMQKLEEQNKKLREEIA
LSKQENQQRLDAAISEKERLQQEVQKLIIERDEHGKSYSSQIQTMQEQVHLQKQQQSSSM
NEVMEKMVAEKERLQVEETRQRVDELQSALQQAQAFKLQTETEVSGYQAELAELRSESSR
LQSECQRLAGERKETMALVGKDVSDDPSLTQLQAERTQLQSHLQRCLYEIQQRDLHCQQL
NAKLQQVVEEKGGVSAQLRAVSQTLRDTQNRCYWLENQALPNQHHQGLAKQGAVSVEVAP
GAPQERSSAVVDMEALEAGELRTRLVEVEQSVVQLSESLAEERTRREAAEEALGLAEDRA
KSVDSSPSRTTQRDFSIQLDTEEEWEALILNPNEPLVTRKVKGGMLACRRWLRGRSLYCS
KLLTSRARSRYLFLGYLLILHVAVLMCLTGAL
NT seq
8559 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtggttttccaatgaagatggcgctcctggccagggagcgctcggctccccc
cagggtggtggtggtgctgaaggaggagaaggaggccaggcagccctggtggaggtggcg
gagcggctggcccagacagagcagctggtggcccagctgaaggagctgatccgtgagaag
gatggctcgctgcgcaccaaggacgagcagctcaaggcagagaaggaggcgtgcgaggcc
aagctgtccaagatgcgtctccagaacaaagccaaggtcacctccctcagcgcccagctg
gaggagctgaagaaaggaggtgctgccgggggtggagctgggggccaggggactcccacc
cacagtaagaagggaggtgcagagggaagcgagcaggccagccgtgggaagatcctcctc
cttaggaagaaggtggaggagctggagcatcagctgtcacagagagatgaggaactggaa
gtcaagtcacgagagctggaggcccagaggcagcgtggtgcggacatggacgccatgctg
gtggagcgaaacaggaagctgtcagagaaggaggcctacatagtccacctgcagactggc
atggccaccggagagcagacggccacgcctccagcccaatcagacacggagcacatggcg
ttgccggaggagagcggagcgggctccctggcggagctgcagctgctggtcctaagtctg
accaggaaggtgggcgagggtgatgaacggtacagcctgctgcaggagcagactgagagc
ctcaaggagctcctagtcacagaaaaggccgccttcgaggacaaggagaacatgtacaaa
caaaacatccagacgtttaaagacatcattctgcagaaagacaacaagctaatggaggtc
aaccagatgcatgagcaggagctcttcaagttggccgccaagtctgacgccagcgctgat
ctggaacagctcctgaaggctctgaaacagaaactacatgagaaggaggaggtgctgcag
ggtaaaaaccaggttattgatgtcctccagggggaggtggactccagagaccagcagatc
aaggaccttgtggagcgggcgcggcggctgcaggtggagcgcgagagcctcgggtccaag
atggaggctgagaagcacgtgatgcgggctcagctgcgtgacctcttggagaagcatcag
ggcgagctgcgccgtgccgccgagtgccacgaggcccagctggccgagcgggagcaggca
tttcgcgggcagctacaggaggagctgggaaggacgcctgtcgccgagcttcagacccaa
acgcaagcagggagcggcggggattctccagccacggcccagaggatgaacgagctggaa
gcacaagccaagctgaaatctgaggaggccagtaaatcggaagccaagttcctaaagata
aaagcctggtcaaagtctcgtattcgacagctggaggacgagctgaggaaaagccagtct
ggcagagtgggccctgacgtgacgtccctgcgtagccgcgtcacggatctggaggaagag
cgggaggagacgctgtggaagctggagcagtacgacgagatcaaggccaagaacgatgta
ctggaagccaagctggtggtgtacgaggagcagcagaggaagatggcctccgacctggag
caggtcaccaagagagccgcctctcaggccagcgagtcaggtagcgccgacgacgcccag
agccaggtgctggactggcaggagatggtgtcggaggcggtgacggccagggaccgtgcc
cgcgaggaaaaggccaccatggccctgcgcatgagccacatggaggaggagagagaggtg
ctggccagccggcagcaggagttggaggaggagctggtgcaggcccggggtctcacaggg
ctacataggggcggcaagaaaatgggaggcgccgcccaccaacacagcctgcaggaagac
tttgagtttgatggcaagcaggcgttccaccaggacccacacagtggcggatctgagagc
accaccccgatggaggagggggagaacatgggaggttggtggcctgagtacacttccccc
aacacaggtggcctgcggtcggtagtggaggagttggagctggagaggaaccagctgcag
gaacagatcctaggactggaggaccgctgtcaggaccttgaggaccggctgcagctgcag
gctcgcatcgagtccctacagaacgagtccgagagactacagggtcagctggccagcctt
cggagccagcagagcagggatgcagagaaacaccatctcctggtcaccagcctcaacgag
cagctcaaaggactcagtgacacccaagagtgtctcgaaacctctcttatagagaaggag
aacacattagtcaagacctctgagaaactagagctcatcgacagcctccgagattcttta
atggaaaaggaggcgcagcacaaagaggtcgccgacaagctgcttcaatctgagaacaat
ctcactgaagtctccacaaaatgcagtacctttgaaaaacagtgttcagaactgaagaca
tcggttgcagatctcacacataagctgagtgtgcttaaagagaagacacagaaacaagag
gccacaataaacactcttcaaaatgacctggatcagacaaacgatgacctggacaaactg
aacaccacccatctggaagaaaggtctcagctgatccacaaccttcaaagctgtgaacgg
gagattgataacctcagagatgtcctctcagacaaggacaaggagatcttagccctctcg
ggcaacatggcggagtacgcagagcagatcatggtgctgaagcaggagatcaagcacaag
gaggaggacctggttcgcatcgagaccgccctcaccaaaacggagcgggaggcacagatc
atcagagactctcagaactcggaccagcaggctctgtacaccaagacggcagagctggtg
gaacagctgaaggatgcagagactgagctgagcaaggccaaagaggagaaggagtcgagg
acagtagaggtggaggaacagctgaaggatgcagagactgagctgagcaaggccaaagag
gagaaggagtcgaggacagtagaggtggaggagctgaggaagcaagtggaagaggacaag
cggaccatcctggaacttcgaggggagatccagcagcacaacgtgggccatcgtaatcat
ctcttagagtgcgaaactcagatctcttcactgaaggagcatgtgactgttgcttcccag
aaactacaggagtccgagggtctcatctctcagttgagggaagcaagtacatccagcaag
acactgaaagaccagctccaggacaaggagcagacgtatgagaaagaactcaaatcggtc
aaggaggaacggaacaagcttaacgcagaggtgtccaaacacaatgatgaccttaagacc
ctgtccaacaagctagagaagcagacagagtgtcaggtacagttgaaaaaagagatgcaa
gaaaaactggagacaatatcctctcttgaggaaaaactcagggccatccaggaagaggcc
gaagtagagcaacagaaatttaacacagaactgcaagtcagagattctgaaaaggagaag
ttggcgaaagacctgcaggttaaattggaaaatatctcaaatatgaagaagctcttgaaa
aacatgaagactgaaaaacaacaactgcaagctgacctgaaggagaaggcagatgaactt
aagtctcaaaagcagcttgtagatgagcttaataaaaaatctacggcagctcttgaactt
aacagcagtttgaactctcaaaaaaatggcctcagagaggagaatcagaggttgcaacag
gatgtagctggaaagcagaaatccatttcagagatgacagatgaaagggattctctgaga
aacaaagtctctgactttgaaacgcagcattcagaaaacagaaaagtcattgaagggctt
ctgaaagacaaggaggagctgagtgttagagccaatgaactgaacagggtcctggagcaa
aataaacagtccatttctgagagtctatttgagaaaacaaatgaatgtagtcttctaact
aaaacactcagggaaagggaggagacagttgcccgtttacaggtgcaaattgacagtttg
aacactcaagtggagcagttccatcacaacattgctgaaaaagagaagtttgtcactgat
caaaactcacaagtagaggcacagcagagccagctgtcgcaactccaggaaacaatgtat
ttactgcaggagcaggagactgccctgaaaactgggctcacggagaaagacaccgtattg
cagcagaaatcagatgagtgtagctctttacagaataaacttgggcagcagaaaaagctt
ctatccaagctacagggtgagactaaatcacttaaaggacaatgctcacaactgactcag
catctggaagaaaaagaagagaccttcagacaaatgacacaggactgtgaaaaccacaaa
gatgagctgaaccagaggaacgagtcaatgaagtcactaagcagtcagcttggtgtcata
aacgagagcagtgcgaagttggagtctgaaaatacagagctgaagaccactctggagaac
cacacagcagaaaacaagaagctgagggaagagatggaacagaggcaagctgaggtggtt
ggcctccacagtcacatccaggcactgagtgagcaaaaccaacaactccgagctgcttat
gagatcagagatcaggaacttgcccagcaaatgcacgttgcatctgagcttgatagaagg
gtaaatgtgactcttgagcagaacacaaacctgtgctcacaactgaacagtctgacagag
gagaagcagatactgcaacaggaattagctgtacagtcggagtccatttctgaattaagc
aaggagaagaacttacttcaagataaactttccaattttgaaatgcaacattcagaaaac
tgcaaaattattgaagggctactgaaagacaaaaaggagctcagtgtagcagtagaggaa
ctcaacaaggtcctagagcaaaacaaacagaccgtttcagagagtttgctggacaaaaca
aataaatgtactaatctcaccaaattgcttagagggagtgaagaggcacttgcacattca
caagaccaagttgacagcttgaacacccaacttgatcaactgaacaacaacataaccgaa
aaagagaagactatcagaaatcaaaactcacaattagaggcccagcagagagagttgtcg
caactccaggagacattggctttattacaggagcaggggaccgcactgaaatctgggctc
acagagaaggacaccatgttgcagcagaaagcagaggagtggagctctttacagaataaa
cttaatcaactgcagggcgagactaaatcacttaaaggacaatgctcacaactgactcag
catctggaagaaaaagaagagaccttcagacaaatgacacaggactgtgaaaaccacaaa
gatgagctgaaccagaggaacgagtcaatgaagtcactaagcagtcagcttggtgtcatg
aacgagagcagtgcgaagttggagtctgaaaatacagagctgaagaccactctggagaac
cacgcagcagaaaacaagaagctgagggaagagatggaacagaggcaaaccgagatacta
gatcttagggacaacatccaagcattgaatgaacagaatgtcagactaaaaaccgaactc
aaaaactctgtcacagaggcatccaagaaacttgaagagatttcagttctcaaggcagag
atttctaacagggacagttatgtgtctaatttaacaaagcaactgacagcagcctgctcg
gacagggatagcttaggtttgaatttgcagcagagaggtgagtccctaaaacagcaggag
atgtttattaagcagttacaaactaagtcagtagagggtgagggtcagatgagccaggcc
atcactgagctgcagacacaagctcagagtcttcagaaaagccttcaagacaaggatgtt
tcgctgcatgaggcggagaaacggctgagtctgctcagagagaagttcaccttagaatct
gaggatttcaaaacccagctgaattcaagtgcagaaacgatgaaacagcttcagggtgat
ctgcgtaatgcggtggaacagagtaatcagctcagtgggaggcttgaagaacaagaggca
cagcttaagcagaaagttgatgattatgtgagtttaaggacatatgtttcagagctggag
gattccaccacacagctcagaggtcaagttgacagcctgacctctgagtcatccctgtta
aaagagaccctgaaagagaaagtcaagttcatccttgaggcacaaagcacctcctcagct
gttagtgaaagcctaaattcaaaactcaaaaccaaagatacagaatgtgagagcttaaaa
gagcagcttttgtacctccaaggatccgttgtaaagctcaataccaaagatgcagaatgt
gagtgcttaaaagagcagctttcacatctccaagagtctgtttcaaagctcaatagtagc
ctcagtgcccagtcctctgaagtggcacgacttcaacaagccttagaggaaagagggact
gccgttatggaccagtcaaaggcccttcaggagctgcagagaagggcagatgaagcagcc
ctcttcaaaacccagttcatggagagcacagagttggtgtcacaactgcaggatcagatt
caggaactctccactaagtctgcaagcctcagccggtcggcagaggagaaccaaagtgcc
tttgtaaatcttcaggagaagtatgctactcatttagaggagctccaggaagctcggatg
atgctttctcaaagggccgaggagatgtccagtcttaacaagtccctcagtgaaagcaac
agcacagttcaggcagcagaaagcaccatagaggtgctgaggaatgagtcttccttgcta
cgtcaagaccttcggcaaatccaaacactgaatgtcgacctttcaaaacaaaaggaagac
gcccttgctacccatcaaaggagcacctcaacattcactgtcgaaattgagagactaaaa
tctcagtatttgcatgtggctgctcaggtaaatgcactgacagaaaatcttgagcagaga
gagatgtctcttcatgccattaacagtcagtacacagcccaggtgaaacaggcagagcac
gtagtgtcagaaatgcagaaactagaagagcaaaataagaagctaagagaggagatagct
ctgtcaaagcaagagaatcaacagcggctggatgcagcaatcagtgaaaaagaacgtctg
cagcaagaagttcagaaactcataattgagagagatgaacacggcaagagctacagcagc
cagatacaaacaatgcaggagcaggtgcatctccaaaagcagcagcaatccagcagcatg
aatgaagtcatggagaaaatggtggctgagaaggaaagactacaggttgaggagacgaga
cagagggtggatgagctgcagagcgccttgcagcaggcacaggccttcaaactgcagact
gaaacagaagtcagcgggtaccaggcagagctggctgaactgaggtctgagagtagcagg
ctgcagtctgagtgccagcgtctggctggggagaggaaggagaccatggccctggtgggg
aaggatgtgtctgatgacccgtcactgacccagctccaggcagagagaactcagctgcag
agtcacctgcagcgctgcctctatgagatccagcagagagatctgcactgccagcagctc
aacgccaagctgcagcaggtggtggaggagaaagggggtgtgtcggcccagctgagggca
gtgtctcagacgctgagagacacccagaaccgctgctattggctggagaaccaggccctg
cctaaccagcaccaccagggccttgcaaagcagggggcggtgtctgtagaagtggctccg
ggagctccccaggagaggagcagtgctgtggtagacatggaagcactggaggccggcgag
ctcaggaccaggctggtggaggtggagcagagcgtggttcagctaagtgagagtctggct
gaagagaggacaaggagggaagcagccgaggaagctctgggactggctgaggacagagcc
aagagcgttgactccagtccatccaggacgacccagagagacttcagcatccagctggat
acagaggaggagtgggaggccctcatcctcaaccccaacgaacccctggtcacacgcaag
gtgaaaggcgggatgctggcctgcaggcgctggcttcgggggcggagcctgtactgctcc
aagctgctgacatcacgggcccgctcgcgctacctcttccttggctacctgctgattctg
cacgtggctgtcctcatgtgcctcaccggcgccctctag
DBGET
integrated database retrieval system
