Oncorhynchus tshawytscha (Chinook salmon): 112238813
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Entry
112238813 CDS
T05605
Symbol
zic1
Name
(RefSeq) zinc finger protein ZIC 1
KO
K09224
zinc finger protein ZIC 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112238813 (zic1)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
112238813 (zic1)
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Gene cluster
GFIT
Motif
Pfam:
zf_ZIC
zf-C2H2
zf-C2H2_15
zf-H2C2_2
zf-C2H2_4
zf-C2H2_8
zf-C2H2_jaz
zf-C2H2_6
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
112238813
NCBI-ProteinID:
XP_024263114
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Position
LG29:38195691..38201913
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AA seq
443 aa
AA seq
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MLLDAGPQYPTIGVTTFGSSRHHSTGEVTEREVALGINPFADGMGAFKINHSSHDLGSGQ
TAFSSQAPGYAAAALGHHHHPTHVSSYSTAAFNSTRDFLFRNRGFGDATSAQHSLFASAA
GSFAGPHGHSDAAGHLLFPGLHEQAASHASSNVVNSQMRLGFTGDMYGRADQYGHVTSPR
SDHYASSQLHGYGPMNMNMAAHHGAGAFFRYMRQPIKQELICKWVEPEQLSNPKKACNKT
FSTMHELVTHLTVEHVGGPEQSNHICFWEECVREGKPFKAKYKLVNHIRVHTGEKPFPCP
FPGCGKVFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYLCK
QCDKSYTHPSSLRKHMKVHEATTQGPQPSPAASSGYESSTPPTIVSPSTENHNSSSISPA
TSTVHHTTSHHTTLSSNFNEWYV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgcttctggatgcaggaccccagtaccccaccataggagtcactacgttcggctcctca
aggcatcactcaacaggcgaagtcacagaaagagaagtggctttggggataaatccgttc
gcagacgggatgggagcttttaaaatcaaccacagctcccacgacctgggctccggccag
acggcgttctcctctcaggctcccggctacgctgctgccgccctgggtcaccaccaccac
ccgacacacgtcagctcctactccaccgcagccttcaactccacccgggactttctcttc
agaaaccggggcttcggggatgccaccagcgcgcagcacagcctgtttgcctcggcagcg
ggaagttttgcagggccacatggacactccgatgccgcggggcacctgctcttcccggga
ctccacgagcaagccgcaagtcatgcatcatcaaatgtcgtcaacagccagatgcggctt
ggctttaccggggacatgtacggccgggctgaccagtacggccatgttacgagcccccgc
tccgaccactacgcctcctcccagctgcacggctatggccccatgaacatgaacatggcg
gctcaccacggggcaggggccttcttccgatacatgaggcagcccatcaaacaagagctc
atctgtaagtgggtcgagcccgaacagttgtcgaaccccaaaaaggcttgcaacaaaacg
ttcagcacgatgcacgagctcgtgacccacctgacagtggagcatgtcggtggaccggag
cagtctaaccatatctgcttctgggaagagtgcgtccgagaaggaaaaccgttcaaagcc
aaatacaaactggtaaatcatatcagagtgcacaccggagagaaaccattcccatgtccc
ttccccggctgtggaaaagtgtttgcccgatcggaaaacctgaaaatccacaaaaggaca
cacactggtgaaaaacctttcaagtgtgagtttgagggctgcgacagacggtttgccaac
agcagcgaccggaagaaacacatgcacgtccatacatctgacaagccttatctctgcaag
caatgcgacaagtcctacacacatccaagctctctgcggaaacacatgaaggttcacgag
gctaccacgcaaggaccccaaccgtcaccagcggccagttccggctacgaatcgtccacg
ccgcccaccatcgtgtccccgtccacagagaaccataattccagttccatatcaccggca
acctcgacagtacaccacacgaccagtcaccacaccacgctgtcgtcaaattttaatgaa
tggtacgtgtaa
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