Oncorhynchus tshawytscha (Chinook salmon): 112238816
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Entry
112238816 CDS
T05605
Symbol
arhgef38
Name
(RefSeq) rho guanine nucleotide exchange factor 38 isoform X1
KO
K20711
Rho guanine nucleotide exchange factor 38
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112238816 (arhgef38)
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112238816 (arhgef38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_9
BAR
SH3_2
SH3_1
Nucleoporin_C
SH3_3
Motif
Other DBs
NCBI-GeneID:
112238816
NCBI-ProteinID:
XP_042174590
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MDPNREANNGSEKEKEKEKVVKRRTRPNFLRYMHLERRKTDTIVVANDDTAADIKGDINL
GTLVRRSQSDKTEYSAKLKEKMAPLSPLSSILASPALDPAEVRLRKMSRRSKVIQELVQT
ERDFLTDLELCIREVVKPLRDRQVVDVDRLFTNMETVCEVSAALLHRLQEATAEPDPEAL
VIGEVFIQAKAALEDVYKIYCYHHDDANSLLKSYEKEEGIKQHFITCVSSLKRIYDQEGK
PNLLDMGSLLIKPVQRVMKYPLLLGELWQATPSDHPDNRPLQEALTAAKIINVNINEFKR
RKDIVMKYKRTEEDGGTLMGKLNKFSIHSIRKKSDRLTGYLKILTGVEPQVRDEVFDKEE
KLFRSLEKAVRQLVKNVHCYLIHIQEMVGVAVQNAADLEDIMKDPDKIDTNSTQHLKNGN
NPYKHFVTGSSPLFSLLLVSLSILSSVDAVHLWGLLALAVPSCAYTAPSLSLHSSVRKER
MAHLVLAPLSSLQGMFAAPQKLIQKRYDKLLDYCSRLERSPSSSTSSASSSSSSPSPVSE
DQGQVAARRDYAALNAQLVEELQRFNMAAHTILSNCVLCLVTLLKGLMDTACHHAPSIQQ
LPAPLSNISEVQSSIMEELNNLTVVKDNAQTLIERKVSFEKTKKILAVPEIQRQTEGNRA
RLLDEYPADRLFQLKRNCNGCQEQDVSLLEGELVGLLEDTDPLGSRGRWLVDTGSTQGYV
YSSFLKQYNPNRDQGRPGQGTGTGITEPQQPIVVLDEDFDNLSLFVSGSGRNNSIRSRSS
IPNFSLYNTSSTSLDRCSTPSSLQGDTEPDIHQDVDTEPDNQQFYAVYGFQARCDQELTM
QENQHVRILKFSDLGGNKDWWLAEANGQKGYVPANYLGKMSYA
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaacagggaggccaacaacggcagtgagaaagagaaggaaaaagagaaagtg
gtcaagaggagaaccaggcctaacttcctgcgctacatgcacttggagaggaggaagacg
gacaccatcgtggtggccaacgatgacaccgccgccgacattaaaggtgacatcaacctt
gggaccctggtgcggaggagtcagtcggacaaaacggagtacagtgccaaacttaaagag
aaaatggcgcccctgtcccccctgtcgtcaatcctggcctctccggccctcgaccccgcg
gaggtccgcctgaggaagatgagccgcaggtcaaaggtcatccaggagctggtgcagacg
gagagggacttcctcaccgacctggagctctgcatcagagaggtggtcaagcccctcaga
gacagacaggtggtggacgtggatcgtctgtttactaacatggagacagtgtgtgaggtg
tcggccgcgctgctccaccggctgcaggaggccacagctgagccagaccctgaggcacta
gtcataggggaagtgttcattcaggccaaagcagcgctggaggacgtctataaaatctac
tgctatcaccacgacgatgcgaactctttactcaagtcctatgagaaagaggaaggaatc
aagcaacatttcatcacctgtgtgtcatcactgaagcggatatacgaccaagaggggaaa
cccaacctgctggacatgggttctctgctcatcaagccggtccagcgggtcatgaagtac
cctctgctgctcggggagctgtggcaggccacgcccagcgatcaccctgacaacaggccc
ctccaggaggctctgaccgccgccaagatcatcaacgtcaacatcaacgagttcaagagg
aggaaggacatcgtgatgaagtacaagaggaccgaggaggatggggggacactcatgggt
aaactgaacaagttcagcatccactctatcaggaagaagtctgacaggctcacaggatac
ctcaagatcctcacaggtgtggagccacaggtgagagatgaggtgttcgacaaggaggag
aagctgtttaggagtctggagaaagcagtgagacaactagtcaagaacgtccactgttac
ctgatacacatacaggagatggtaggtgtcgcggtccagaatgctgcagacctggaggac
atcatgaaggatccagacaaaatagacacaaacagtactcagcacctgaagaacggcaac
aacccatacaagcactttgttaccggctcttctcctctcttctctctcctgcttgtcagc
ctgtctatcctttcttccgtggacgctgttcacttgtggggcctgcttgccctagctgtg
ccctcctgcgcttacacggctccctctctctctctccactcctccgtcagaaaagagagg
atggcacatctggtcctggcacccctctcctctctccaaggcatgttcgctgccccgcag
aaactcatccagaaacgctacgacaaactattggactactgcagccgcctggagcgctct
ccctcctcctccacgtcttctgcctcttcttcttcctcctctccatcacctgtatccgag
gaccagggccaggttgcggcgcggcgggactacgcagccctcaatgctcagctggtggag
gagctgcagagattcaacatggccgcccatactattttgtccaactgtgtcctctgcctg
gtgaccctgctgaaaggcctgatggacacggcctgccaccacgcaccctccatacagcaa
ctaccggctcctttgtccaacatcagtgaagtccaaagcagcatcatggaagagctcaac
aacctgactgtcgtcaaggacaacgcacagactctaatagaacgcaaagtcagcttcgag
aaaacaaagaaaattttagctgtcccagagatccagcgtcagacagagggcaacagggcc
aggctgctggacgagtatccagctgacaggctgttccagctgaagaggaactgtaacggg
tgtcaggagcaggatgtcagcctgctggagggggagctggtgggcctgctggaggacaca
gaccccctggggagccggggccgctggctggttgacacgggcagtacccagggttacgtg
tactcatccttcctgaagcagtacaaccccaacagggatcagggtcgaccaggtcagggt
acaggtacggggatcacagagccccagcagccgatcgtggtgctggacgaggactttgac
aacctcagcctgtttgtgtcgggtagcgggaggaacaacagcatacggagccggagcagc
atacctaacttcagcctctacaacacctccagtacctcgcttgacagatgctccaccccg
tccagcctacagggcgacacagagccagacattcaccaggatgtggacacagagccagac
aaccagcagttttatgcggtgtacgggttccaggcacgctgcgaccaggagctgaccatg
caggagaaccagcatgtgaggatcctcaagttcagcgacctgggaggcaacaaggactgg
tggttggccgaggccaacggacagaagggctacgtcccagccaactacctcggcaaaatg
tcatacgcataa
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