Oncorhynchus tshawytscha (Chinook salmon): 112238885
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Entry
112238885 CDS
T05605
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
112238885 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otw03400
]
112238885 (nhej1)
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
112238885 (nhej1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
112238885
NCBI-ProteinID:
XP_042174070
LinkDB
All DBs
Position
Unknown
AA seq
311 aa
AA seq
DB search
MERDTVDGVLLDCPWVPVCISGSQLLAKTWFGDTAYRILLTDLHSVWEEEMDTRAIQDRA
QELNRRLRAPVHAFFSHMCEVAQPCLSGRVEDRGALQFSLNHHGGDINLKLKSELAGVPF
YWEFRCTPAPVALVCSQLVRPLLLMSRLLQRQVGQLGALLARKDTELQDYRDNGAVLSRE
RLQTELFEEQSYRENFLTQTVPQVCARQGGLGFDSELQELYSAVTSYGNTNARKRKISER
HAPEEDRDPNHAASGTQPPGEEVNHGLDQGDRARTTDSETPNDEKTTVPMTTAADRPSSR
PKKKKAKGLFG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggagagagatacagttgatggggttctgctagactgtccctgggtaccagtgtgtatc
agtgggtctcagctcctggcaaagacctggtttggggacacagcgtaccgcatcctgctc
acggacctgcactctgtgtgggaggaggagatggacaccagggccatccaggacagagct
caggagctgaacaggcgattgcgggctcccgtccatgccttcttctctcacatgtgtgag
gtggctcaaccctgtctgtctggacgggtggaggaccggggtgcgcttcagttctccctc
aaccaccacggcggtgacatcaacctgaagttgaagagtgagctggctggggtgcctttc
tactgggaattccgctgcacccctgcccctgtggctttggtgtgcagtcagcttgtgcgc
cccctgctgttgatgagcaggttactgcagagacaggtgggccaactgggagctctgctg
gccagaaaagacactgagctccaagactacagggacaatggggcagtgctgagcagagag
cgattgcagacagagttgtttgaggaacaaagctacagagagaacttcctgacacagact
gtgccacaggtatgtgcgaggcagggcggtctggggtttgactctgagctgcaggagctc
tactcagccgtcacgtcctacggcaacaccaacgctcgcaaacgtaagatctctgagaga
cacgcccccgaagaggaccgtgaccctaaccacgccgccagcggcacacagcccccagga
gaggaggtgaaccatgggctggaccagggggatagagccagaaccacagactcagagaca
cctaatgatgaaaagactacagttcccatgactactgccgcagatcggccctcctcccga
cccaagaagaagaaagctaaggggctttttggatga
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