KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112238906
Entry
112238906         CDS       T05605                                 
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03015  mRNA surveillance pathway
otw04261  Adrenergic signaling in cardiomyocytes
otw04382  Cornified envelope formation
otw04530  Tight junction
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    112238906
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    112238906
 09150 Organismal Systems
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    112238906
  09158 Development and regeneration
   04382 Cornified envelope formation
    112238906
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:otw01009]
    112238906
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:otw03019]
    112238906
   03036 Chromosome and associated proteins [BR:otw03036]
    112238906
Protein phosphatases and associated proteins [BR:otw01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     112238906
Messenger RNA biogenesis [BR:otw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     112238906
Chromosome and associated proteins [BR:otw03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     112238906
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_RIG_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_EML WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_HPS5
Other DBs
NCBI-GeneID: 112238906
NCBI-ProteinID: XP_042181920
LinkDB
Position
LG08:complement(77557379..77591340)
AA seq 443 aa
MEEETDTPKINNSFLCDHNYATEADVISTVEFNPSGELLATGDKGGRVVVFQREQETKSV
PQRRGEYNVYSTFQSHDPEFDYLKSLEVEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKI
RERDRRPEGYNLKDEDGQIRHPSTITSLRVPVLQNSDLMVEATARRVFSNAHTYHINSIS
VNSDFQTYISTDDLRVNLWNLEITDQSFNIVDIKPCNMEDLTEVITAAEFHPQQCNTLAY
SSSRGSVRLCDMRKQALCDTHCKFFEEPEDPFTRSFFSEIISSISDIKFSHSGRFLMTRD
YLTVKVWDLNMETRPVQTYQVHDYLRGKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNN
FFRMFDRNTKKDVTLEASRENSKPRAILKPRKVCVGGKRRKDEVTVDSLDFSKKILHSTW
HPQENIIAVAASNNLYIFQDKVT
NT seq 1332 nt   +upstreamnt  +downstreamnt
atggaggaggagactgacacccccaagatcaacaacagcttcctatgcgaccacaactat
gccactgaagctgacgtcatctccacggtggagtttaacccttcgggggagctgttggcc
acaggggacaaaggaggaagagtggtggtcttccagagagaacaggagactaaaagcgtg
ccccagaggcgaggggagtataatgtgtacagtacattccagagtcatgatccagagttt
gactacctgaagagtctggaagtagaggagaagatcaacaagatcagatggctgccacag
cagaacgctgcctacttcctcctctccaccaacgataagacagtgaagctctggaagatt
cgtgagagagacagacgaccggagggatacaacctgaaggatgaagacggacaaatcaga
cacccatccacaatcacctcactacgggtgcctgtcctccagaactcagatctgatggtt
gaggcaacagcgcggcgtgtgttcagtaacgcccacacctaccacatcaactccatctcc
gtgaactccgacttccagacttacatctccacggatgacctcagggtcaacctgtggaac
ctggagatcactgaccagagcttcaacatcgtggacattaagccgtgtaacatggaggat
ctgacggaggtgattacagcagcagagtttcatcctcagcagtgtaacaccttggcttac
agcagcagtagagggtcagtacgactctgtgacatgaggaaacaggcgctctgcgacaca
cactgcaagttctttgaggagccagaggaccccttcactcgttcatttttctcagagatc
atctcttccatctcagacatcaagtttagtcacagcgggcgcttcttgatgacacgggac
tacctgacggtcaaggtgtgggacctcaacatggagaccagaccggtccagacataccag
gtccatgactacctgaggggtaagctgtgttctctgtacgagaacgactgcatcttcgac
aagtttgagtgtgtctggaacgggtcagacagtgtcattatgacgggatcatataataat
ttcttccggatgtttgatcggaacaccaagaaagatgtgactctggaggcttccagagag
aacagcaaaccccgggccatcctcaaaccacgcaaggtgtgtgtgggagggaagcgtcgt
aaagacgaggtgactgttgacagtctggacttcagtaagaaaatcctccactccacctgg
cacccacaggaaaacatcatcgctgtggcagccagtaacaacctttacatcttccaggac
aaggtcacctag

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