KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112238918
Entry
112238918         CDS       T05605                                 
Symbol
pak1ip1
Name
(RefSeq) p21-activated protein kinase-interacting protein 1-like isoform X1
  KO
K14830  protein MAK11
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:otw03009]
    112238918 (pak1ip1)
Ribosome biogenesis [BR:otw03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    112238918 (pak1ip1)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 Beta-prop_IFT122_1st WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd DSE1_N EIF3I WD40_Gbeta Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_SCAP ASA1 PEP5_VPS11_N Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_WDR41 Beta-prop_VPS8 NBCH_WD40 Beta-prop_NUP159_NUP214 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_Aladin Beta-prop_Vps41 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_Nup120_160 TRM82_WD Beta-prop_LRRK2 VPS11_N Ge1_WD40 Beta-prop_WDR75_2nd B-prop_COPA_B_2nd CFAP251_N Beta-prop_pof12 SH3_7
Other DBs
NCBI-GeneID: 112238918
NCBI-ProteinID: XP_024263212
LinkDB
Position
LG10:81417790..81429889
AA seq 364 aa
MGPVIELIAGSYEQIAFGYRVSTGEVEWTATADFTHHAHTASVSAVATSERYIATGSRDE
TIQIYDMKKRVEHGALLHHDGTISCLEFYGSSHLLSGGQDGLLCVWSTRNWECLKSIRAH
KGQVTSLSVHPSGKLALTVGTDKTLRTWNLIDGRSAFIKNIKQNAVIVKWSPEGDKYVVV
IGDKVDVYDLETATLTSTIINPKRISSIKFLTNSILAIAGDDETVRLCDINTQKVLCEFE
AHETRVKSVDSFTVDDFCVLVTASNDGFIKMWKLNLESLEPPVLLGKVNTTARLTCLAVW
KPTTLQEPPPEVKTEPTTSHDVKDVLELEKKRKKRVRISTVEVVQEEDASPKKKKDGGKK
KLKT
NT seq 1095 nt   +upstreamnt  +downstreamnt
atggggcccgtaatagagctcattgctggaagttacgagcagatcgcctttggttaccgg
gtgtctacaggtgaagtggagtggacagccacggcagacttcacccaccacgcccacact
gcctcagtgtctgcggtggccaccagcgagaggtatatcgctacaggaagcagagacgag
accatccagatctacgacatgaagaagagggttgaacatggcgctctgctgcatcacgat
ggtaccatttcatgtctggagttctatggctcctcccacctgctgagtggaggacaggac
gggctcctgtgtgtttggagcaccaggaactgggagtgtcttaagtccatcagagcacac
aaaggtcaagttacgtcactgtccgtccatccctcagggaaactggccctgaccgtcggc
acagacaagacactccgaacgtggaatctaatcgacggaagatcggctttcatcaaaaac
attaaacagaatgcggtgatagtgaagtggtctcccgagggggataagtatgtggtagtg
atcggcgacaaggtggacgtttatgacctggaaacagcgactctgacatcaaccatcatc
aaccccaagaggatctcatccatcaagttcctcactaattccatcctggccatagctggg
gacgacgagacagtcaggctgtgtgacatcaacactcagaaggtgctctgtgagttcgag
gctcatgaaaccagggtgaaatcagtggacagtttcaccgtggacgacttctgtgttctg
gtgacggcgtcaaacgatggcttcatcaaaatgtggaaacttaaccttgagtccttggag
cctccggtcctcctggggaaggtgaatactacagctaggttgacctgtctggccgtgtgg
aagcccaccactctacaggagcctcccccggaggtcaaaacagaacctaccacgtctcac
gacgtcaaggatgtactggagcttgagaagaagaggaagaagagggtcaggatctcgact
gtagaagtggtccaagaggaagatgcttcacccaagaagaaaaaagatggtgggaaaaaa
aagctgaaaacttaa

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