Oncorhynchus tshawytscha (Chinook salmon): 112239018
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Entry
112239018 CDS
T05605
Name
(RefSeq) zinc finger and SCAN domain-containing protein 2-like isoform X1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112239018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112239018
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112239018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2HE
zf-C2H2_jaz
zf-LYAR
Zn-ribbon_8
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
112239018
NCBI-ProteinID:
XP_042174276
LinkDB
All DBs
Position
Unknown
AA seq
999 aa
AA seq
DB search
MASVKLEDCSQTLELNVNMKDEEEEEKIGTSVSHGLELSLRPVTSTVRTNPACLSPSTPS
PNLHSLGPDCDSGAQFALQDPEMASVKLEDCSQTLELNANIKDEEEEEKIGESVSHGRLE
LSLKPVTSTVRTNPACLSPSTLSPNLQSLGPDCDSGAQFALQDPEMASVKLEDCSQTLEL
NANIKDEEEEEKIGKSVSHGRLELSMRPVTSTVRTNPACLSPSTRSPNLQSLGPDCDSGG
QFLQQDPEMASVKLEDCSQTLELNVNIKDEEEEEKIGKSVSHGRLRLSLRPVTPTVRTNP
ACLSPSTLSPNLQSLGPDCVSGAQFALQDPEMASVKLEDCSPTMELNIDIKDEEEEEKIS
HDMRLVTSTVRTNPACLSPSTLSPNLQSRGPDCDSGAQFALQDPEMASVKVEDCSQTLEL
NVNIKDEEEEEKIGKSVSHGRLELSLKPITSTVRTNPACLSPSTLRPNLQSRGPDCDSGA
QFALQDPEMASVKLEDCSQTLELNVNIKDEEEEEKIGKSVSHGRLRSSLRPVTSTVRTNP
ALLSPSTLSTNLQSLGPDCDSGAQFALQDPEMASVKLEDCSQTLELNVNIKDEEEEEKIG
KSVNHGDHVETFSTSREQQLEDHRAKRSHHCPHCEEIFPILSNLKIHLKIHTDQNLYSCT
DCGKRFTTSQALTAHQKVHTGEKPYFCFVCGESFSQQGHLKTHHRIHTREKPYSCFDCGE
SFSQQGHLKTHQRIHTGEKPYSCSDCGKSFSQLGSLKTHQRIHTGEKPYSCSYCGECFSQ
LGNLKTHERIHTGEKPFSCTDCGKSFTTSQALTVHQRVHTGEKPYYCSECGKSFSQLDML
KCHQRIHTGEKPYSCSDCGKSFSQLGNLEAHQRIHTGEKPYSCSECGKCFTTSAELKVHK
RSHTGEKPYTCSDCRKSFSRLDMLKCHQRIHTGEKPYSCSDCGKRFSQLGNLEAHQRIHT
GEKPYSCSDCGKSFSRLDTLKRHKCIHKGQKPHQFSQTS
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagtgaagctggaagactgcagtcaaacactggagctgaatgtcaacatgaaa
gatgaagaagaggaggagaagattgggacatctgtttctcatggactagaattaagtctg
aggccggtaacatcaacagtgaggacaaacccagcctgcctctctccttccacaccgagt
ccaaacctacattcactgggtcctgattgtgacagtggagcccagtttgctctgcaggat
ccagagatggcatcagtgaagctggaagactgcagtcaaacactggagctgaatgccaac
attaaagatgaagaagaggaggagaagattggggaatctgttagtcatggacgactagaa
ttaagtctgaagccggtaacatccacagtgaggacaaacccagcctgcctctctccttcc
acactgagtccaaacctacagtcactgggtcctgattgtgacagtggagcccagtttgca
ctgcaggatccagagatggcatcagtgaagctggaagactgcagtcaaacactggagctg
aatgccaacattaaagatgaagaagaggaggagaagattgggaaatctgtttctcatgga
cgactagaattaagtatgaggccggtaacatcaacagtgagaacaaacccagcctgcctc
tctccttccacacggagtccaaacctacagtcactgggtcctgattgtgacagtggaggc
cagtttttacagcaggatccagagatggcatcagtgaagctggaagactgcagtcaaacc
ctggagctgaatgtcaacattaaagatgaagaagaggaggagaagattgggaaatctgtt
tctcatggccgactcagattaagtctgaggccggtaacgccaacagtgaggacaaaccca
gcctgcctctctccttccacactgagtccaaacctacagtcactgggtcctgattgtgtc
agtggagcccagtttgcactgcaggatccagagatggcatcagtgaagctggaagactgc
agtccaacaatggagctgaatattgacattaaagatgaagaagaggaggagaagattagt
catgatatgaggctggtaacatcaacagtgaggacaaacccagcctgcctctctccttcc
acactgagtccaaacctacagtcacggggtcctgattgtgacagtggagcccagtttgca
ctgcaggatccagagatggcatcagtgaaggtggaagactgcagtcaaacactggagctg
aatgtcaacattaaagatgaagaagaggaggagaagattgggaaatctgtttctcatgga
cgactagaattaagtctgaagccgataacatcaacagtgaggacaaacccggcctgcctc
tctccttccacattgagaccaaacctacagtcacggggtcctgattgtgacagtggagcc
cagtttgcactgcaggatccagagatggcatcagtgaagctggaagactgcagtcaaaca
ctggagctgaatgtcaacattaaagatgaagaagaggaggagaagattgggaaatctgtt
tctcatggccgactcaggtcaagtctgaggccagtgacatcaacagtgaggacaaaccca
gccctcctctctccttccacactgagtacaaaccttcagtcactgggtcctgattgtgac
agtggagcccagtttgcactgcaggatccagagatggcatcagtgaagctggaagactgc
agtcaaacactggagctgaatgtcaacattaaagatgaagaagaggaggagaagattggg
aaatctgttaatcatggagaccatgttgagacattctctacatccagagagcaacagctg
gaagatcacagagctaagaggtctcaccactgcccacattgtgaggagattttcccaatt
ctatcaaatctaaaaatacacctaaaaatacacacagaccagaatctgtattcctgcaca
gattgtgggaagagattcacaacatcacaggctctgacagctcatcagaaagtgcacact
ggagagaagccatacttctgctttgtctgtggggagagtttctctcaacagggccatcta
aaaacccaccatcgaatacacacaagagagaagccatactcctgctttgactgtggggag
agtttctctcaacagggccacctaaaaacccaccaacgaatacacacaggagagaagcct
tactcctgctctgactgtggaaagagtttctctcaactgggcagcttaaaaacacaccaa
cgtatacacacaggagagaagccttactcctgctcttactgtggggagtgtttctctcaa
ctgggcaacttaaaaacacacgaacgtatacacacaggagagaagcctttctcctgcact
gactgtgggaagagcttcacaacatcacaagctctgacagttcatcagagagtgcacact
ggagagaagccttactactgctctgaatgtggaaagagtttctcccaattggatatgtta
aaatgtcaccaacgaatacatacaggagagaagccttactcctgctctgactgtggtaag
agtttctctcaactgggcaacttagaagcacaccaacgtatacacacaggagaaaagcct
tactcctgctctgagtgtgggaagtgcttcacaacatcagctgagctaaaagttcataaa
agatcacacacaggagagaagccttacacctgttctgactgtagaaagagtttctcccga
ttggatatgttaaaatgtcatcagcgaatacatacaggagagaagccttattcctgctct
gactgtggaaaaaggttctcccaactgggcaacttagaagcgcaccaacgtatacacaca
ggagagaagccttactcctgctctgactgcgggaagagtttctcccgattggatacctta
aaacgccacaaatgtatacataaagggcagaagcctcatcagttctctcagaccagctaa
DBGET
integrated database retrieval system
