Oncorhynchus tshawytscha (Chinook salmon): 112239019
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Entry
112239019 CDS
T05605
Symbol
snx4
Name
(RefSeq) sorting nexin-4 isoform X1
KO
K17919
sorting nexin-4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112239019 (snx4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112239019 (snx4)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112239019 (snx4)
Membrane trafficking [BR:
otw04131
]
SNARE
SNARE associated proteins
Others
112239019 (snx4)
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
112239019 (snx4)
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
112239019 (snx4)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
112239019 (snx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
Motif
Other DBs
NCBI-GeneID:
112239019
NCBI-ProteinID:
XP_024263304
LinkDB
All DBs
Position
LG03:complement(55341443..55358019)
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AA seq
437 aa
AA seq
DB search
MMADSGSEEIAVIGNTDLTSAELENNIKNTMVEIEKWTSLLRKMEISVGEAEKRTGKNTV
NMQEIYTVYLIETRPVDAVTEGIIPAPDSLWRRYSEFELLRNYLLVTYPFVVVAPLPEKR
AEIVWHKLSADNMDPDFVERRRVGLENFLLRLASHPVLCNDKIFYIFLTEEKGWKEMVYE
TGFQAKADSRLKAMNAAFRVKNPDKRFTELKHYSDELQAVVSQLLRVRARVADRLYGVYK
VHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDAYAASVDDILEEEEHYADQLKEYLFYTEA
LRAVCRKHELTQFELEMAAQDLASKKQQKEELVTGTVRTFSLKGMTSKLFGQETAEQREA
KLQVLEQQIEEGEEAVKEKNTESDEFVKTAWIDIEHFKDQKDRDLKEALISYAIMQISRC
KKGIQVWTNAKECFNKM
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagactcgggatccgaggaaatagcggtgatcgggaacaccgacctcacatcg
gcagaactcgagaacaacattaaaaacacgatggtcgagattgagaaatggactagtctt
ctaagaaagatggagatcagcgttggagaggcagagaaaaggactgggaagaatacagtc
aacatgcaggagatatacactgtttacctaattgagacacggccggttgatgctgtgaca
gaaggtataatcccagccccagactccttatggaggagatacagcgagtttgagctactc
agaaactacttgttggtcacttatccctttgtcgttgttgccccgttacccgagaagagg
gcagagattgtgtggcacaagctgtcagcggacaacatggacccagactttgtggagaga
aggagggttggactggagaacttcctgctccgattagcctcccacccagttctctgcaat
gacaagatcttctacatcttcctcactgaggaaaaaggatggaaggaaatggtgtacgag
acaggatttcaagcaaaggctgattccaggttgaaagctatgaatgcagcattcagggtg
aagaatccagacaaacggtttacagagctgaaacactacagcgacgagctacaggctgta
gtctcccagctgctgagagtacgggcaagggtagcagatcgactgtatggggtgtacaaa
gtgcatggaaactatggacgagtcttcagtgagtggagtgccatagagaaagagatggga
gatggactacaaagtgctggtcatcacatggatgcgtatgctgcttctgtagatgatatt
ctggaggaagaggagcactatgctgatcagctgaaggagtacctattctatactgaggca
ctaagggcagtgtgcaggaagcatgagttgacacagtttgagctggagatggctgcacag
gacttagcctctaagaaacagcagaaggaggagctggtcacagggactgtgcggacgttc
tcactgaaggggatgaccagtaagctgtttggccaggagactgcagagcagagggaggct
aagttacaagtgttagaacagcagatagaggagggagaggaggctgtgaaagagaagaac
accgagagcgatgagtttgtgaagactgcctggatagacattgagcactttaaagaccaa
aaggaccgggacctgaaggaggccctaattagctatgcaatcatgcagatcagcaggtgt
aaaaagggaatacaagtgtggaccaacgcaaaggagtgtttcaacaagatgtga
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