Oncorhynchus tshawytscha (Chinook salmon): 112239020
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Entry
112239020 CDS
T05605
Name
(RefSeq) zinc finger protein 558-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112239020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112239020
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112239020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2HE
zf_UBZ
zf-C2H2_jaz
zf-C2H2_11
Zn-ribbon_8
PknG_rubred
zf-LYAR
Motif
Other DBs
NCBI-GeneID:
112239020
NCBI-ProteinID:
XP_042170348
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MASVKLEDCSQTLELNVNIKDEEEEEEKIGTSVSHGMRPVISTVRTNAGLLSPSTLSPNP
QSLGPDCDSRAQFLQQDPEMASVKLEDCSQTMELNVNIKDEEEEEEKIGKSFSHGLELSL
RPVTSTVTTNPACLSPSTLCPNLHSLGPDCDSGAQFALQDPEMASVKLEDCSQTLELNVN
IKDEEEEEKIGKSVSHVHTGDHVETFSTSREHQQEDHRAKMSHHCPHCEEIFPFLPKLKI
HLKIHTGEKPYSCSECGKCFKTSTELKVHQRTHTGEKPYSCSECGKCVKTSASLKLHQRT
HTGEKPYYCSECGASFSQLGHLKRHEHIHTGEKPYSCSDCGNRFSLMGTLKQHERIHTGE
KPYSCSECGKCFKTSSSLKSHQRTHTGEKPYSCSECGKCFKTSISLKVHQRTHTGEKPYS
CSDCGKSFFHLGTLKQHERIHKLEKPYSCSGCGKRFSHLGTLKQHERIHKLEKPYSFSDC
EASFSRPDTLK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagtgaagctggaagactgcagtcaaacactggagttgaatgtcaacattaaa
gatgaagaagaagaggaggagaagattggaacatctgtttctcatggtatgaggccggta
atatcaacagtgaggacaaacgcaggcctcctctctccttccacactgagtccaaaccca
cagtcactgggtcctgattgtgacagtagagcccagtttttacagcaggatccagagatg
gcatcagtgaagctggaagactgcagtcaaacaatggagctgaatgtcaacattaaagat
gaagaagaagaggaggagaagattgggaaatctttttctcatggactagaattaagtctg
aggccggtaacatcaacagtgacgacaaacccagcctgcctctctccttccacactgtgt
ccaaacctacattcactgggtcctgattgtgacagtggagcccagtttgctctgcaggat
ccagagatggcatccgtgaagctggaagactgcagtcaaacactggagctgaatgtcaac
attaaagatgaagaagaggaggagaagattgggaaatctgtttctcatgttcacacagga
gaccatgttgagacattctctacatccagagagcatcagcaggaagatcacagagcaaag
atgtctcaccactgcccacattgtgaggagattttcccatttctaccaaagctaaaaata
cacctaaaaatacacacaggagagaagccttactcctgctctgaatgtggaaaatgcttc
aaaacatcaactgaactaaaagttcatcagaggacacacacaggagagaagccttactca
tgttctgaatgtggaaaatgcgtcaaaacatcagcatcactaaaacttcatcagagaaca
cacacaggagagaagccttactactgctctgaatgtggtgcgagtttctctcaactgggc
cacctaaaaagacatgaacatatacacacaggagagaagccttactcctgctctgactgt
ggaaataggttctctctaatgggtaccttaaaacaacatgaacgtatacacacaggagag
aagccttactcatgttctgaatgtggaaaatgcttcaaaacatcatcatcactaaaaagt
catcagagaacacacacaggagagaagccttactcatgttctgaatgtggaaaatgcttc
aaaacatcaatatcactaaaagttcatcagagaacacacacaggagagaagccttactcc
tgctctgactgtggaaagagtttctttcacctgggtaccttaaaacaacatgaacgtata
cacaaattagagaagccttactcctgctctggctgtggaaagagattctctcacctgggt
accttaaaacaacatgaacgtatacacaaattagagaagccttactccttttctgactgt
gaggcaagtttctctcgtccggacaccttaaaatga
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