Oncorhynchus tshawytscha (Chinook salmon): 112239040
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Entry
112239040 CDS
T05605
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 22-like isoform X1
KO
K11366
ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112239040
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112239040
04121 Ubiquitin system [BR:
otw04121
]
112239040
03036 Chromosome and associated proteins [BR:
otw03036
]
112239040
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112239040
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112239040
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
112239040
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112239040
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
112239040
SLIK complex
112239040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
DUF6529
Motif
Other DBs
NCBI-GeneID:
112239040
NCBI-ProteinID:
XP_042174952
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MSPAGCSHVNAYKVDNWRQNLRVIYQCFVWSGSAEARRRKVLQNDVRWTALAKSCICHMC
GAHLNRLHSCLSCVFFGCFTKKHIHEHAKNKRHNLAIDLLYGGIYCFVCQDYIYDKEMEQ
IAKEEQRKAWKLQGVGEKYSTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCF
MNCIVQALTHTPLLRDFFLSDRHKCEMQSNSCLVCEMSQLFQEFYSGHRWPHIPFRLLHL
VWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDTTRDDNGKKANNPNHCSCIIDQIFTG
GLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDGSTVNGESHLSGATTLT
DCLRRFTRPEHLGSSAKIKCGGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKIT
TYVSFPLELDMTPFIASSKESRMNGQYQQTVEVLNSDNKYSLFAVVNHQGTLESGHYTSF
IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgagtccagccgggtgctcacatgtgaacgcttataaggtggacaattggaggcaaaac
ctacgagtcatatatcaatgctttgtttggagcgggagtgctgaagccaggagacgaaag
gtgcttcagaatgatgtgagatggacagcattggccaaatcatgtatctgtcacatgtgc
ggcgcccacctgaaccggctccactcctgtctctcctgcgtcttcttcggctgcttcacc
aagaaacacatccacgagcacgccaaaaacaaacgacacaatctagcaatagacttatta
tatggtggaatatattgtttcgtgtgtcaagactacatatacgacaaagagatggaacag
attgccaaagaagaacagaggaaagcctggaaattgcaaggtgtaggggagaaatactcg
acgtgggagcctacgaagcgagagctggagttattacggcacaatccaaagcgaaggaaa
atcactacaaactgcaccatcggtttacgagggttgatcaacctgggcaacacgtgcttc
atgaactgcatcgtccaggccctcacccacacccccctgctgcgcgacttcttcctgtcc
gacaggcacaagtgtgagatgcagtccaactcctgtctggtgtgtgagatgtcacagctc
tttcaggagttctactcgggccaccgttggccccacattcccttccggctgctgcacctg
gtgtggactcacgcacgtcacttagcgggctacgagcaacaggatgcccacgagttcctc
atcgcagcgctggacgtgctgcaccgccactgtaaaggagacaccacccgagacgacaac
gggaagaaggccaacaatccaaaccactgtagctgcatcattgaccaaattttcactggc
ggcctccaatcagacgtcacctgtcaagtctgccacggtgtgtccaccacgatagaccca
ttctgggacatcagtctggacctgccgggctcatccactcccttctggccccttagcccc
gggggagacggctcaacggtcaacggagagagccacctttcaggggccaccacgctcaca
gactgtctacgcaggttcactcggcctgagcatctaggaagcagtgccaaaatcaaatgt
ggcggttgccatagttaccaggagtccaccaaacagctgacgatgaagaagctccccatc
gtggcgtgtttccatctcaaacggtttgaacactctgccaaactgaggaggaagatcacc
acctacgtctccttccctctagagctggacatgacacctttcatagcttccagtaaggag
agcaggatgaatggccagtatcaacagacagtagaagtattaaacagcgacaacaagtat
tctctgtttgcggtggtgaaccaccagggcaccctggagagtggtcactacaccagcttc
atccgccaacacaaggaccagtggttcaagtgtgacgacgccatcatcacaaaggccagc
atcaaggacgtgttggacagtgaagggtatctgctgttctatcacaagcagttcctggag
tatgagtag
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integrated database retrieval system
