Oncorhynchus tshawytscha (Chinook salmon): 112239058
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Entry
112239058 CDS
T05605
Name
(RefSeq) stromal membrane-associated protein 2-like isoform X1
KO
K12486
stromal membrane-associated protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112239058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112239058
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112239058
Endosome - Golgi transport
Arf GTPase associated proteins
112239058
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ArfGap
Motif
Other DBs
NCBI-GeneID:
112239058
NCBI-ProteinID:
XP_042151007
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Position
LG13:5218717..5273282
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AA seq
584 aa
AA seq
DB search
MMMIGKSVKDIDRYQTVLTSLLSLEENKFCADCKSKGPRWASWNLGIFICIRCAGIHRNL
GVHISRVKSVNLDQWTQEQIQCVQEMGNAKARRLYEAFLPECFIRPETDQSAEMFIRDKY
EKKKYMDKILDVNRLRKEKSCENIPKEPVVFEKMKLKRENSPKTQTQSPSISDLLGLDDP
APHAAISNGRSSSGERGSPLVANPATVHSDLNLFSSLPASSSTNTTPVGSSMPRGCVAVS
VPENLSLFLDSAPRQEGSRTKMSKDSILSLYATTPTSHQNLAARSGLYMNPAQLGYYGSY
HSLATEGGAMGGAMVTSHSMMALSGQQQNGMMGGQQQSVMGAQQNGMVAAQQNGFMAQQG
VMGQAVNTSLFMTGVPHSMINHQQSIMGAQQSVMMGAQQSGMMGAQQCGMMGVQQSGMMG
AQQRGMMGAQQRGMMGDQQRGMMGAQQNGMMGAQQNGMMAAQHSGMMAAQQSGMMGAQQR
DLMGAQQSGMMGAQQSGMMGAQQRGMMGAQQQSIIGRQQKRMTGGVASVPQQVQQDQCAI
TQMTQHMAGVNFYGTNAMTGYGSQHNGGPKTQNSNHMTTSHVWK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatcggtaaatcggtcaaagacattgacagatatcaaactgtcctcacttcg
ctactgtcactcgaggagaacaaattctgcgcggattgtaaatccaaaggtcccagatgg
gcgtcatggaacctgggtatattcatctgtatccgctgtgctgggatccacaggaacctg
ggcgtccacatctccagggtcaagtctgtcaacctggaccaatggacacaggaacagata
cagtgtgttcaggagatggggaatgccaaggcccgacgactctatgaagctttcctacca
gaatgtttcatacgaccagagactgaccagtcagcagagatgttcatcagggacaaatat
gagaagaagaagtacatggacaagatcctagatgtcaacaggcttagaaaagagaagagc
tgtgaaaacatccccaaggagccagtggtgtttgagaagatgaagttgaagagagaaaac
agcccaaagacacagacccagtctccgtctatctcagacctcctaggacttgatgatcct
gctccccatgctgctatatccaatggtaggtccagctctggagagagggggagtcctctg
gtggctaacccagctacggtgcactctgacctgaatctattcagctctctgcctgcctct
tcctccaccaacaccacgccggtgggtagctccatgcccaggggttgtgtggctgtgtcg
gtacctgagaacctcagcctgttcctggactcagcacccagacaggagggctctaggaca
aagatgtctaaggactccatcctctccctctatgcaaccacacccacatcgcaccagaac
ctagctgcacggtctggcctgtacatgaacccagcccagctgggctactacggatcgtac
cattccctggccacggaggggggagcgatgggaggagccatggtgacatcacactccatg
atggccctgagtggtcagcagcagaatggcatgatgggagggcaacagcaaagcgttatg
ggagctcagcagaatggaatggtggcagcacaacagaatggctttatggctcaacagggt
gtcatggggcaagcagtcaacacatccctgttcatgacaggagtgccacacagcatgata
aatcatcagcaaagcattatgggagctcagcagagtgttatgatgggagctcagcagagc
ggcatgatgggagctcagcagtgcggcatgatgggagttcagcagagcggcatgatggga
gctcagcagagaggcatgatgggcgctcagcagagaggcatgatgggcgatcagcagaga
ggcatgatgggagctcagcagaacggcatgatgggagctcagcagaacggcatgatggca
gctcagcacagcggcatgatggcagctcagcagagcggcatgatgggagctcagcagaga
gacttgatgggagctcagcagagcggcatgatgggagctcagcagagcggcatgatggga
gctcagcagagaggcatgatgggagctcagcaacaaagcatcattggacgtcaacagaaa
cgcatgacgggtggagtggcgtccgtgcctcagcaggtacagcaggatcagtgcgccatc
actcagatgacccagcacatggcgggggtgaacttctacggcaccaacgccatgacggga
tatggcagtcagcacaacggcggaccaaagactcaaaactccaaccacatgacgacatct
cacgtctggaagtga
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