Oncorhynchus tshawytscha (Chinook salmon): 112239090
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Entry
112239090 CDS
T05605
Symbol
lsm11
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11 isoform X2
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112239090 (lsm11)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
112239090 (lsm11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
112239090
NCBI-ProteinID:
XP_024263370
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All DBs
Position
LG21:complement(31941147..31943253)
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AA seq
373 aa
AA seq
DB search
MEERERRGDKQQKCPESEKKERESTSACASDATEHTAEEEDDIAAKLDVTSDKFDPLLAL
YSTTVPLPYPNVKCFNNIAEYESFLKGGRGRAKPENVEKKQRKARKGVADPERIEKLKRL
MVNNPIVGEDGEEGTSGTARRCRIQKAAKNVLTRMPLHRGSPLGEMHRCVQERIRVKVHI
RTFKGLRGVCSGFIVAFDKFWNMAMVDVDETYREPLLGEALYHEKALTVTRLFDKLKLQE
SAALREYEEKKKQIDKKKAEPFHPLPETQTRDRRRGDPNRGDPRRRGDPRAVDPRLARAT
VGPPVGDDPGALGATGKTQGSNVKGQESGTEGPKRRGSQKKEVSQPYGRVHTRHVNQLFI
RGENVLLVNLQPL
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagggaaagaagaggagataaacaacaaaaatgtccagaatcagaaaagaaa
gagagagaatcaacaagtgcatgtgcttcagatgcaaccgaacatacggcagaagaagaa
gatgatatcgcggcaaagttggacgtcacctccgataaatttgatccactcctggcgcta
tactcgactacagtgcctcttccatacccaaacgtgaaatgcttcaacaacatagccgag
tatgagagctttctaaaggggggacggggccgcgccaagccggagaacgtggagaaaaaa
cagaggaaagccaggaaaggtgtagcagatccggagaggatagagaaactgaagaggttg
atggtgaacaacccgatagtgggagaagatggagaggaggggaccagcggcactgcccgc
cgttgtagaatacagaaggctgccaagaatgtcctgaccaggatgcctctccatagagga
agtcctctgggggagatgcaccgctgcgtgcaggagaggatcagagtgaaagttcacatc
agaaccttcaaggggctccgtggagtgtgttctggcttcatagtggccttcgacaagttc
tggaacatggcgatggtagatgtagatgagacctacagggaacctcttctgggtgaagct
ctctaccacgagaaggccctcactgtcacacggctctttgacaagctgaaactccaggag
agtgcggcgctgagagaatatgaggagaagaagaagcagatagacaagaagaaagctgaa
cccttccatcccctgcctgagacccaaaccagagaccgcagacgaggtgaccccaataga
ggggaccccagaaggagaggagaccctagggcagtggatccccgacttgcaagggccaca
gttgggcccccagtgggcgatgaccccggagccctaggggccacaggtaagacccagggg
tcaaatgttaaaggtcaggagtcagggactgaggggccgaagagaagagggtcccagaag
aaagaagtgtcccagccctacgggagggttcatacgcgccacgtcaaccagctcttcata
cgtggagagaacgtgcttctagtcaacctacaaccactctga
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