Oncorhynchus tshawytscha (Chinook salmon): 112239104
Help
Entry
112239104 CDS
T05605
Symbol
sptlc3
Name
(RefSeq) serine palmitoyltransferase 3 isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00600
Sphingolipid metabolism
otw01100
Metabolic pathways
Module
otw_M00094
Ceramide biosynthesis
otw_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
112239104 (sptlc3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
otw01007
]
112239104 (sptlc3)
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
112239104 (sptlc3)
Amino acid related enzymes [BR:
otw01007
]
Aminotransferase (transaminase)
Class II
112239104 (sptlc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
112239104
NCBI-ProteinID:
XP_042161581
LinkDB
All DBs
Position
LG24:complement(29985794..30099792)
Genome browser
AA seq
586 aa
AA seq
DB search
MARTTAPVPNGKLNIQLNGNNFKNANCKKNGYHNKAQKNSTAHSAGPPSSRQRFQRPESF
ENPPMYVAVMTYLGFGIVTLFGYFRDFLRAVGLEKCHIAREREEQKNESEVSFLNIPLAK
PTRLVIQQFHLQDFVPLYQDFENFYTRNLYMRVRDNWNRPICSLPGPVFDVMERVSPDYN
WTFSLTGKTIDDVINMGSYNYLGFAENDGDFLKTVADRTQQYGLGVCSTRQEMGNLAIHE
ELEQLVATFLGVESSMIFGMGFATNSMNIPALVGKGCLILSDELNHTSLILGARLSGATI
WVFKHNNMQSLERLLREAVCSGQPRTHRPWRKVLIMVEGIYSMEGSVVRLPDIVALKKKY
KAYLYLDEAHSIGAVGPTGRGVTELFGLDPSDIDVMMGTFTKSFGAAGGYIAGKKELVDY
LRSHSHSAVYASAMSPPVTEQILRAMKCIMGLDGTTVGQARVHQLAENTRYFRSRLQEMG
FIIYGNDDSPVVPILLYMPGKVVAFSRAMLKRKIGVVVVGFPATPITEARARFCLSAAHT
KAMLDQVLFDLNELGDDLCLKFSRRKYSPRPQQHNNNDDTDFELDS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaactacagcccctgtgcccaacggaaaactcaacatacaactgaacgggaat
aacttcaaaaacgcgaattgtaagaaaaatggataccacaataaggcgcagaaaaacagc
acagcacacagcgctgggcccccctccagtcggcagaggtttcagagaccagaatccttt
gagaatcctcccatgtacgtagctgtgatgacatacctggggttcggcatcgtcacactg
ttcggatacttcagggacttcctcagagcagtaggactggagaaatgtcacatcgccagg
gagagagaggagcagaagaatgaatcagaggttagtttcctgaatattcccttggctaaa
ccaactcggctcgtaattcaacaatttcatttacaggattttgtccctctgtaccaagac
tttgagaacttctacacccgtaacctgtacatgagagtaagagacaactggaacagacct
atatgcagtctgcctggccctgtgtttgacgtgatggagagggtgtccccagactacaac
tggacattcagtttaacagggaagaccatagacgatgtcatcaacatgggttcctataac
tacctgggtttcgctgagaacgacggtgatttcctgaaaactgtggcagacagaacccag
cagtatggtctcggggtctgcagcactcgacaggaaatgggtaacctggctattcatgag
gagttggaacagcttgtagccaccttcctgggggtagagtcctccatgatcttcggcatg
ggctttgctaccaactctatgaacataccggcactggtcggaaagggctgtctgattctg
agtgatgagctgaaccacacctcgctgatcttgggggccaggttgtcaggggcaactatt
tgggtgtttaagcacaacaacatgcagagcctggagcgtctgttgagggaggcggtgtgt
agtgggcagcctcggacccaccgaccatggaggaaggttctgatcatggtggaaggaatc
tacagtatggaggggtcggtggtgcgtctgccagacatcgtagccctgaagaagaagtac
aaggcctacctgtacctagacgaggcacacagtatcggggcggtggggccgacagggagg
ggtgtgacagaactgtttgggctggacccctcggacatcgacgtcatgatgggaacgttc
accaagagtttcggggctgcaggaggatacatcgctgggaaaaaggagctggtcgactac
ctgcgtagccactcccacagtgcggtgtacgcctcggccatgtctcctcccgtcacagaa
cagatcctgagagccatgaaatgcatcatggggctggatggaaccaccgtgggtcaggcc
agggtgcaccagctagcagagaacacacgctacttcaggtctcgtcttcaagagatgggc
ttcatcatctatggtaacgatgattctcctgtggtcccaattctgctctacatgccagga
aaagttgtggctttctctcgcgccatgctgaagaggaagataggagtggtggtggtaggg
tttcctgctacgcccatcacagaggcacgggcccgcttctgtctgtctgctgcacacacc
aaggccatgctcgaccaggtgttgtttgatctgaacgagttaggagatgatttgtgtctg
aagttctcccggaggaaatattctcctcgtccacaacaacacaacaacaacgacgacaca
gactttgagctggacagttag
DBGET
integrated database retrieval system
