Oncorhynchus tshawytscha (Chinook salmon): 112239152
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Entry
112239152 CDS
T05605
Symbol
fer1l6
Name
(RefSeq) fer-1-like protein 6
KO
K22127
fer-1-like protein 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112239152 (fer1l6)
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112239152 (fer1l6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
dsRBD2
Motif
Other DBs
NCBI-GeneID:
112239152
NCBI-ProteinID:
XP_042162748
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All DBs
Position
LG26:51556909..51605090
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AA seq
1362 aa
AA seq
DB search
MPVESPPQLIDKDNFLLFGTVFEATMIDRKIGDKPINFELSVGNFGNVQEGSPQVSGRRK
VEKPVAERVWDGQDLDSTPLIDSQDPKPGLWQSPCQSTTPPEKPLTDGNRHYMYLPIQHQ
KPCVHVMSCWEDRTYRLHSSNFLENIAVMFEEGVAKTDELNKLSDPGTEALMRRVFKEFI
MDARRFIAFAEGKVRMNHLTVLDKKRLTMCKQELESMVGKAETISEGKRKARSVKEMLQE
ALKLTQKLRFLVEEPQHTIPDVFVWMLSNNKRVAYARISARDLIYTASPEERGKDCGKIQ
TLFLKPPGKRVAGWSIQAKLDVYLWLGSCRDSSHVLDNLPGGFEPKGGATEEQLLPAILP
VHLAYRDEHKFQMRAHMYQARGLIAADSTGLSDPFARVTFLTHSHTTAIINQTLTPTWNQ
MLLMTRVTLHGDLAHLEQEPPCIVIEVYDDDALGKAEYLGSTVAVPVVRVSEQPYSPPQL
QYSPLFSGFQSGGELLGAFELIQIPESGEEYLPALDEPDGQIYPVPGNIRPVLSRYRLEV
LFWGLRELKKVQLLSVDRPQVFIECAGKSLRSSVIQSYKTNPNFTTLVDAFDLELPENEN
LHPPLNISVVDWRAFGRSTVVGNYTINNLKPFKYTHPPALSAPTSPRGPDSREDLGMMPQ
SNVDNVIPLSSEDVSINIYQEISPTPPPPPPPEPDKKEKEWRKSSRKSTKRRKRTVADES
GDNVLDWWSKYYASVDKRQQAKQKEVHPFPYVYDNVTGQQDGDMKKKPILNVSQEGVSKL
ATLQLYDKELESEFGPFDDWVNTFELFRGKANDEVGRSNEERFVGKFKGRFCLYKLTEEE
DEWEESPNSGQFKITRGIPPNTSVKVLIRVYIVSASNLHPADTDGKSDPYIVLRLGKTEI
KDRDNYIPKQLNPVFGRSFEIQATFPKDSLLTTLIYDHDTIGTDDLIGETCIDLENRFYS
RHRATCGLPTEYSIDGYNAWRDSTKPSELLTTLCKENRLDGPYFRPGKITIGGNVFAGKT
LFMDEEQTVESYEHLALKILHRWTEIPGVGCRLVPEHIETRTLYNKARPGMDQGQLQMWV
DMFPMDMPHPRPSVDISPRKPKGFELRIIIWNTEDVILEDTNILTGTQSSDIYVKGWLKG
FEDDRQETDVHYNSLTGEGNFNWRLVFPFNYLPAEKVVVVSKRGSIFSLDKTEQKLPAML
VMQVWDFDRLSSDDFLGTVELDLHGFPRGAKSAKACKMDMLMDSVETISIFQQKRSRGWW
PFVKAGELTGKVEAEFHLVTSEEAEKNPVGRARKEPEPLEKPNRPDTSFSWFVNPFKCFF
HLIWRNYKKYIIIALVLLITALFIALLLYTLPAAISQKIVNG
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggagtctccacctcagctcattgacaaggacaactttttgctgtttggaacg
gtattcgaggccacgatgatcgacagaaagatcggagacaaacccattaactttgagttg
tctgttggtaactttgggaacgtccaggagggctctccccaggtcagcggtaggaggaag
gtggagaagccagtagcagagagggtgtgggatggtcaagatctcgacagtacccccctg
attgactcccaggaccccaaacctgggctctggcagtctccatgccagtccaccacaccc
ccagagaaacccctcactgatggaaacaggcattacatgtacctgcccatccagcatcag
aagccttgtgtccatgtgatgagctgctgggaggatcggacgtaccgtcttcacagctct
aactttctggagaacatcgctgtcatgtttgaagaaggcgtggccaagacagatgagctg
aacaagttgtcagatccaggaacagaagctctcatgcgccgagtctttaaggagtttatc
atggacgccaggagattcatagcctttgcagaagggaaagtgagaatgaaccatctgaca
gtgttggataagaaacgcctgaccatgtgtaaacaggagctggagagtatggtcggaaag
gcagaaaccatctcagaggggaagaggaaggctcgcagtgtgaaggagatgttgcaggag
gctctaaaactcacacagaaactgagattcctagtggaagagccccagcataccatccca
gatgtgtttgtgtggatgctgagtaacaacaagcgtgtggcttatgcccgcatctctgcc
cgtgacctgatctacactgccagccctgaggagagaggcaaagactgtggcaagatccag
actttattcttgaagcccccagggaagcgcgtagcaggctggtcaattcaggccaaactg
gacgtgtacctgtggctgggcagctgcagagactcctctcatgtgctggataacctgcct
ggagggtttgagcccaaagggggcgccactgaggagcagcttctacctgccatcctacct
gtacatctggcatatagagacgagcacaagttccagatgcgcgcccacatgtaccaggct
cgagggctaatagcagcagactctacaggactctcagaccccttcgccagggtcaccttc
ctgacacatagccacaccacggccatcatcaaccagacgttaaccccgacctggaaccag
atgttgttgatgacccgggtcacgctgcatggagacctagctcacctggagcaggagcca
ccgtgcatcgtcatcgaggtgtatgatgacgatgctctgggcaaggcagagtacctgggc
agcacggtggcagtgcccgtggtgagggtgtcagagcagccctactctcctccccagctc
cagtacagtcctctgttttctggattccagtctggtggagaactgctgggggcctttgag
ctcatacagatcccagagtcaggagaagagtatctgcctgcgctggacgaaccagacggt
cagatctaccctgtacctggcaacattagacctgtactgagcaggtatcgattagaggtg
ttgttctggggcctgagggagctgaagaaggtgcagctcctgtctgtggaccgtccccag
gtgtttatcgagtgtgctgggaaaagcctgcgctcctctgttatccagagctacaagacc
aacccaaacttcaccacgctggtggacgccttcgacctggagctgcctgagaatgagaac
cttcaccctcccctgaacatcagtgtggtggactggcgagcattcggacgctccaccgtg
gtgggaaactacaccatcaacaacctgaagcccttcaaatacacccatcctccagcgctg
tccgcgccaacctcaccacggggacctgacagcagagaggatttaggtatgatgccccag
tctaatgtagacaatgtaatccctttgtcatctgaggatgtctcaatcaacatctaccag
gagatctctcctacacccccaccaccacctccacccgaaccagacaagaaggaaaaggaa
tggaggaagagctctcggaagtctactaagagaaggaagcgtaccgtagcagatgagtct
ggggataacgtcctcgactggtggtccaagtactacgcctcggtagacaagagacagcag
gccaagcagaaggaggtacatccctttccatacgtctatgataatgtcactggacagcag
gatggagacatgaaaaagaaaccaatattgaatgtctctcaggaaggtgtgtccaaactg
gcaactctccagctctatgacaaggagttggagtcggagtttggtccgtttgatgactgg
gtcaacaccttcgagctgttcagagggaaagccaatgacgaggtggggcgttctaatgag
gagaggttcgttgggaagttcaagggtcgtttctgcttgtacaagctaactgaggaggag
gatgagtgggaggagagtccaaactcaggccagtttaagatcacccgagggatcccgccc
aacacctctgtcaaggttctcattagggtgtacatcgtatcggcatccaacctccaccca
gccgatactgatgggaagtctgacccctacattgttctgaggctggggaaaactgagata
aaagacagagacaactacatccccaagcaactcaacccagtctttggcaggtcctttgag
atccaggctacgtttcctaaagactccctgctgactactctgatctatgaccacgacacc
atcgggactgacgatctgatcggggagacgtgcatagatctggagaaccgcttctacagc
cgacaccgggccacctgcggcctacccactgagtacagcattgatggttataacgcctgg
agagactccaccaagccatctgagctgttgactacgctctgtaaggagaacaggctagat
ggaccctacttcagacccggaaaaatcaccatcgggggcaatgtcttcgctgggaaaaca
ctgtttatggatgaagagcagacggtggaatcctacgaacatctggctctgaagatcctt
cacagatggactgagattccaggggtggggtgtagacttgtcccagagcacatcgagaca
cggactctgtacaacaaggccaggcctggcatggaccagggccagctccagatgtgggtg
gacatgttccccatggatatgccccacccacgcccctctgtggacatctcccctcgtaaa
cctaaagggtttgagttgagaatcatcatctggaacactgaagatgtgattctggaggac
actaacatcctcacaggaacacagtctagtgacatctacgttaaagggtggcttaagggc
tttgaggacgatcgccaggagactgatgttcactacaactctctgactggggagggtaac
ttcaactggcgcctggtgttcccctttaactacctgcctgccgagaaggtggtggtagtc
agtaagagggggagcatcttctccctggacaagacagagcagaagctaccggccatgttg
gtgatgcaggtctgggactttgacaggctgtcgtctgatgatttcttgggtacagtagag
ctggacttacatggatttcctcgcggggccaagtcagccaaggcctgcaagatggacatg
ctgatggacagcgtagagacgatctccatcttccaacagaagaggtccaggggctggtgg
ccctttgtcaaggctggggaactcacggggaaagtagaggcggagttccacctggtgaca
tcagaggaggcagagaagaatccggttggtcgagcccgcaaggagcctgaacccctggaa
aaacccaaccggccagacacgtcattctcgtggtttgtgaacccttttaagtgcttcttc
cacctgatctggaggaactataagaagtatatcatcatcgctctggtcctgctcatcaca
gctctgttcatcgccctgctgctctacaccctgccagcagccatctcacagaagatagtc
aatggttaa
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