Oncorhynchus tshawytscha (Chinook salmon): 112239168
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Entry
112239168 CDS
T05605
Name
(RefSeq) cingulin isoform X1
KO
K06102
cingulin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112239168
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Gene cluster
GFIT
Motif
Pfam:
Myosin_tail_1
Laminin_II
Motif
Other DBs
NCBI-GeneID:
112239168
NCBI-ProteinID:
XP_042163107
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All DBs
Position
LG03:complement(1423487..1450315)
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AA seq
1032 aa
AA seq
DB search
MAHPHPQSLPYPTHPHPQSLPYPTQPHPQTPVNRLISRFDGSSSTREQQRGRSPVAEDPR
NTISSSLAPNPYSSPSPSLTPNPYSSPHSSLGRGQGSVSKATPHPASQWAPPGRFVAVET
PSANRTDPLVTPDLLQSSEVTSEEEQVMQTIYSVLREGTSESDSVIRHKVRVIFQKIKGL
KPSESSGEEWRREKRDLERKMMELQTSLQEERRGSVGSSDPVLKAELDSCMDENMQLQET
VDRKKTELHQTHSELSQLRMERESAESRVREMEDRLGELQEELRTENGNKTECIVCLQDL
VTCQASLLEVSMLKQKLEDSLRQRERELTALKGALKDEVATHDKDMETLREQYSTDMERL
RSTVEQVSQSQAGIESERLRVNASVRTLQQQLEDCRDESGHWMTQFHNTRDELRTTKQEM
LQARLEKEELEEELNEVQERVNTMKQQIPDPSHTHTLNQELQSLRADLQQAQSEAEKKRA
ELDKKVMEVISLKKANQEQEAELKYEMDRLRGQSNRAKEDLAKAQERTKQLPDPSVVSGL
QSELTDARGERDRLGEKLSSTEQELQSNTERLARTQTELNALRDSQQEHEAANTRLREKL
SRLESQLASSASESSEAELSLQAELRGLRQELDEARRGASRLGQDHRQLSLRLEDMEKER
DQLTQTNTQLEEQRRQQERSLDKLNKEFESLSQSSGEEVHVLRAQLEEQRERSRSETQEA
QRQGNDTLVELERSQTSLKRLEEEASRQKKDLLSVVEERDNVQLDKELLTNRLHHLEAEL
ENSRSSLTDKSRELRSTEDKMKRLELELEEEKGSVELLTDRVTRTRDQMEQLRSELMQER
SSRQDLELDKNALERHLKELKTRVSDMEGQSRSSVGVAQLESKVHELEERLHSEDREKNS
MLSSQRRLEKKLKELNFTLEEERHQHTEQRDQLSLRVKALKRQVDEGETEVERMEGLRRK
AQREMEEQMELKEALQGRVTALETELKRKVQQAQRQALDSSALSSDEDDEGLYDPSSITS
ILTGSNLHTSSC
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggcacacccccacccccagagccttccttacccaacacacccccaccctcagagcctt
ccttacccaacacagccccacccccagacccccgtcaacagactgatcagcaggtttgac
ggcagcagcagtaccagagaacaacagagggggcgctctcctgtagcagaggaccctaga
aacaccatctcctcttccctcgcccccaacccctactcctccccttcaccctctctcacc
cccaacccctactcctcccctcacagcagcctggggcggggccaaggctccgtcagcaag
gcaacaccccacccagccagtcagtgggctccgccggggaggtttgtcgctgtggagacg
ccgtcagccaatcggacggacccgctggtgacccctgacctgcttcagagttcagaggtc
accagtgaggaggagcaggtcatgcagaccatctacagtgtactcagagaagggaccagt
gagagtgactcagtcatcagacacaaagtcagggtgatcttccagaagatcaagggactc
aagcccagtgagagctctggtgaggagtggaggagagaaaagagggatctggagaggaag
atgatggagctacagacctctctacaggaggagaggaggggctctgtgggcagctctgac
cctgtgttaaaggcagagctggattcatgtatggatgagaacatgcagctccaggagact
gtggacaggaagaagactgaactacaccagacacactctgagctgagtcagttgcgtatg
gagagagagagtgctgagtccagagtcagagagatggaggaccgactgggcgagctacag
gaggagctgaggacagagaacggcaacaagacggagtgtattgtgtgtctacaggacctg
gtgacgtgtcaagcgtctctgttggaggtgtccatgttgaagcagaagctggaggattct
ctgagacagagagagagggagctgacggccctgaagggagctctgaaggacgaggtggcc
acgcacgacaaagacatggagacacttcgagaacagtacagcactgacatggagagactg
aggagtacagtggagcaggtctcacagtctcaggcgggtatcgagtcagagcggttgcgt
gtgaatgcgtcggtgcgtactctacagcagcagctggaagactgcagggacgagagtggc
cactggatgacgcagttccacaatacaagagatgaactacggaccaccaaacaggagatg
ctgcaggctcgtctggagaaagaggagcttgaggaagaactgaatgaagtacaggagagg
gtcaacaccatgaaacagcagataccagaccccagtcatacacacacactcaaccaggag
ctgcagagtttgcgtgccgatctgcagcaggcccaatcagaggcagagaagaaaagggcg
gagctcgataaaaaggtcatggaggtaatctccctgaagaaggccaaccaggagcaggag
gcggagctcaagtatgagatggacaggctgaggggccaatcaaatcgagccaaagaggat
ctggccaaggcccaggagagaaccaaacagctccctgacccgtcggtcgtgtctggcctg
cagtcagagttgactgatgctcgtggggagagagaccgactgggagagaaactctccagc
actgagcaggagctgcagtcaaacacagagcggctggccagaacccagacagaactaaac
gctctcagagactcacagcaggagcacgaggcagctaacacacgcctccgagagaaactc
tcacgcctggagtctcagctggcttccagtgcatcagagagttcggaggcagagctgtcc
ctccaggcggagttgagggggttgaggcaggagcttgacgaggccaggagaggagcctct
cggctgggccaggaccaccggcagctcagtctgcgtctggaggacatggagaaggagagg
gaccagctcacacagaccaacacacagctggaggaacagaggagacagcaggagcggtcc
ctggacaaactcaataaggagtttgagtctctgtcccagtcgtctggtgaggaggtgcat
gttctcagggcccagctggaggaacagagagagagatctcgcagtgagacacaggaggcc
cagaggcagggcaatgacacactggtagaactggagaggagccagacctccctcaagaga
ctggaagaggaggcgtcacgtcagaagaaggatctgctctctgtggttgaggagcgagac
aatgttcaactggacaaggagctgctcaccaaccgcctgcaccacctagaggctgaactg
gagaacagcaggagcagcctcacagacaagagcagggagctccgcagcacggaggacaag
atgaaacgactggagctggagctggaggaggagaagggatctgtggagctactcactgac
agagtcaccaggaccagagaccagatggagcagctgcgttcagagctgatgcaggagaga
tcctccagacaggacctggagctggacaagaatgccctagaaagacatttgaaggagttg
aagaccagagtatctgatatggagggtcagtctcgctcctctgtaggagtggctcagctg
gagagtaaagttcacgagttggaggaacgcctccacagcgaggatagggagaagaactcc
atgttgtcgtctcagcgtcgcctggagaagaaactgaaggagctcaactttaccctggag
gaagagagacaccaacacacagaacagagagaccagctgtctctgcgtgtgaaggctctg
aagagacaggtggatgagggggagaccgaggtagagaggatggagggattgaggaggaag
gcccagagagagatggaggaacagatggaactaaaggaggccttacagggcagagtcacc
gcgctggagactgagctcaagaggaaggtgcagcaggcgcagcgtcaggccctggactcg
tcggctctgagctctgacgaagatgatgaaggcctgtacgacccctccagcatcacgtcc
atcctcactgggagcaaccttcacaccagctcctgctag
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