Oncorhynchus tshawytscha (Chinook salmon): 112239204
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Entry
112239204 CDS
T05605
Name
(RefSeq) integrin alpha-4
KO
K06483
integrin alpha 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04512
ECM-receptor interaction
otw04514
Cell adhesion molecules
otw04672
Intestinal immune network for IgA production
otw04810
Regulation of actin cytoskeleton
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112239204
04514 Cell adhesion molecules
112239204
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112239204
09142 Cell motility
04820 Cytoskeleton in muscle cells
112239204
04810 Regulation of actin cytoskeleton
112239204
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
112239204
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112239204
04515 Cell adhesion molecules [BR:
otw04515
]
112239204
04090 CD molecules [BR:
otw04090
]
112239204
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112239204
Exosomal proteins of other cancer cells
112239204
Cell adhesion molecules [BR:
otw04515
]
Integrins
Integrin alpha subunits
112239204
CD molecules [BR:
otw04090
]
Proteins
112239204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
DUF5370
Motif
Other DBs
NCBI-GeneID:
112239204
NCBI-ProteinID:
XP_024263463
LinkDB
All DBs
Position
LG03:56212679..56242232
Genome browser
AA seq
1023 aa
AA seq
DB search
MERKTPGNLSCCWSFLLAYFWCCNLTECYNLDVDHPISFSGPNGSLFGYSVLLHKNQKNT
WLLVGAPVANSSSYPAVKKPGAIYKCSISDKRECQQISTGVDSCGKTCFSESDNQWLGVS
LSRQPRDGHVLACGHRWKNVFYSRKENQNKLPHGVCYRYESDLKQSQPLIPCYKDHQRKF
GEDYGSCQAGISNFLTEDLIIMGAPGTSYWTGSVLVYNTSSRVLSAYVDDSSTVLYGSYL
GYSVGAGHFLHPDSTEIVGGAPQHGQTGKAYLFRAEENMLKIISEVKGSKLGSYFGASVC
AVDLNGDGLSDLLVGSPMYSTVREEGQVHVYINQGAANMKEAEFQLVGSNSYAARFGETI
TDLGDIDDDGFADVAVGAPQEEELRGAIYIYNGRKTGISQTFSQRITGSVLGIELKMFGQ
SVSGAIDVDENGYQDVAVGAFLSDSAVVLRTRPVIVVEAFMPLPVSVDRYVALCSDNGLP
AVCINATVCFRVHARHFTSSIVLQYNLTADTQHKESFPSRFHFHGNGTSNATTGRVKTRH
DQLTCVPHQAFIRKDVRDIFTPIHFEVSYTLREHTVHNGGSTFPALKPILQQRGGHGNLV
ANKTEFARYCSLANCSTNLQVSAQLVLPQRHNNMPYFALGNGKTIMLNTTLVNTGDDAFL
PRLQLRFPSNLHYIKVLDAEEKFVSCDISEENKTIVGVDCSVGNLYLSSGAKVNISFLLD
VNQSSSVGDASISINASGDNYENEDLLHDNSATLMLPLRYGVDVNIHGFMTPTSFVFGDQ
APIPVDCYTETFNYTYKVVNIGPSKSLNTIVEIDIPKILSPYPYRLLHVTDFHTSLGECS
IQNDSIAVEDDCEVPQSSFIKELVFFFSKISKRKMFCAYGDDLCLTLECRLGDMDIGKEA
TIHMEVKLNPTVLQLSPGRHGVMLMESTGVITSPREDPQTIILQKIPIAQVVLEAHFSQK
PQAAVEVFIIVVSLLVGLLILALLIFALWKIGFFKRQFKKEDEIRRDSWDYVPKHLTKTE
SRS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaaaaacgccgggcaatctttcttgctgttggagctttcttctcgcgtacttc
tggtgctgtaatctcaccgagtgttacaatttggatgtagaccaccccattagtttcagt
ggaccaaatggatctttatttggatattctgtattgttacacaagaaccagaaaaacaca
tggttattagtcggagctccagttgcgaattcatcttcctacccagccgtaaaaaaacca
ggagcaatttataagtgcagcatctcggacaagagagaatgtcaacaaatatcaacaggt
gtggacagttgtgggaagacatgcttctctgagagtgacaaccagtggctcggagtcagc
ctgtccagacagcctcgtgatggccatgtattggcatgtgggcatcgttggaagaacgtg
ttctattccaggaaagaaaaccagaacaagctgcctcatggtgtctgttacagatacgag
tctgacctcaaacagtctcaaccactcatcccatgctacaaagatcaccaacggaagttt
ggtgaagactatggatcatgccaagcagggatatccaactttctgactgaggacttgata
attatgggagccccagggacatcgtactggactggatctgtcctggtctacaacacctcc
agcagagtcctgtctgcctatgtggatgacagcagcactgtcctctatggcagttacctg
ggctactcggttggggccggccacttcctccaccctgactccacagagattgttggcggt
gcgccccagcacgggcagactggtaaggcctacctattcagagctgaagaaaacatgctg
aagataatcagtgaagtcaagggcagcaagcttggctcgtattttggtgccagtgtgtgt
gctgtggacctgaatggagatggcctgtctgatctactggtaggatctcccatgtacagc
accgtgagagaggaaggacaagtccatgtctacataaaccaaggagccgctaatatgaag
gaagcagagtttcagttggtgggaagcaactcgtatgctgccagatttggggagaccata
actgatctgggagatattgatgacgatggctttgctgatgtggcagtgggggctccgcag
gaagaagagctgcgtggggctatatatatctacaatgggaggaaaacagggatctctcag
accttctctcaaaggatcactggctctgttctgggtattgagttaaagatgttcggacag
tctgtgtcaggagccatcgatgttgatgaaaacggttaccaagatgtagcagtaggggcc
ttcctctcagactcggctgttgttctgaggactcgtccagtaatagtggtagaagccttc
atgcccctgcctgtcagtgtagaccgctatgtagcgctgtgttctgacaacggtcttcct
gctgtctgcatcaatgctacagtctgcttcagggtccatgctcgacacttcacctcttca
atagtgctccagtataatctgacagcagacacgcagcacaaggagtccttcccctcacgt
ttccatttccacggaaacgggacgtccaacgctacaacagggcgggtcaaaaccagacac
gaccagctgacctgcgtcccccaccaggccttcataaggaaagatgtccgagatatcttc
acacccatccattttgaggtttcgtacactctcagagagcacactgtccataacggagga
tccactttccctgctctgaaacccatactgcagcagagaggggggcacggtaacctggtg
gccaataagacagagtttgctcggtactgttcattggccaactgctcaaccaatctgcag
gtctctgctcaactggtgttaccacagagacacaacaacatgccgtactttgcacttggc
aatgggaagaccatcatgttgaacacaaccctggtgaacacgggagatgatgcattcctc
cccagactccagctccgattccccagtaacctgcactacatcaaagtgcttgacgcagag
gagaagtttgtgagctgtgacatttcagaggagaacaagacaatagtaggagtggattgc
agtgtgggaaacctatacctcagctctggggccaaggtcaatatcagttttctgttggat
gtgaaccagagtagtagtgttggtgacgctagcatctccatcaacgctagtggggacaat
tatgaaaacgaggatcttctgcatgacaactctgccactctgatgttacccctgagatat
ggagtagatgtcaacattcatgggtttatgactccaacatcctttgtatttggtgaccag
gcacctattccagttgattgctacacagagacattcaactacacttacaaggttgtcaat
attggtccaagcaaatctctcaacacgatagtggagattgatattcccaagatcctgtca
ccatatccatacagattactccatgtcacagacttccatacgtctcttggagaatgctcc
attcaaaacgactccattgcggtggaggatgactgtgaggtgccacagtcctctttcatc
aaagaactggtcttcttcttctccaaaatcagcaaacgcaaaatgttctgtgcctatggt
gatgacctgtgcctgactctggagtgtagactaggagatatggacattgggaaagaagcc
accattcacatggaagtgaagctgaatcctaccgttctacagctctcacctggacgtcat
ggagtgatgctgatggagagtactggcgtcatcacatcaccaagggaggaccctcaaacc
atcatcctacagaagatccctatcgctcaggttgtgttggaggcccacttcagccagaag
cctcaggcagcagtggaggtgtttatcattgtagtgagtctactggtgggactcctgatc
ctggccctgctcatcttcgccctctggaagattggtttctttaaaaggcagtttaagaag
gaggatgagatcaggagggatagctgggactatgtaccaaaacatttgactaagactgag
agtagatcctaa
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integrated database retrieval system
