Oncorhynchus tshawytscha (Chinook salmon): 112239227
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Entry
112239227 CDS
T05605
Symbol
ctnnb1
Name
(RefSeq) catenin beta-1 isoform X1
KO
K02105
catenin beta 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04310
Wnt signaling pathway
otw04510
Focal adhesion
otw04520
Adherens junction
otw04916
Melanogenesis
otw05100
Bacterial invasion of epithelial cells
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112239227 (ctnnb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112239227 (ctnnb1)
04520 Adherens junction
112239227 (ctnnb1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
112239227 (ctnnb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112239227 (ctnnb1)
05100 Bacterial invasion of epithelial cells
112239227 (ctnnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Cnd1
HEAT_2
Adaptin_N
ARMC9_ARM
Atx10homo_assoc
Queuosine_synth
Motif
Other DBs
NCBI-GeneID:
112239227
NCBI-ProteinID:
XP_042175060
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MASQSDLMELDMAMEPDRKAAVSHWQQQSYLDSGIHSGATTTAPSLSGKGNPEEEDVDNQ
VLYEWEQGFSQSFTQDQVSDIDGQYAMTRAQRVRAAMFPETLDEGMQLPSTQFDGAHPTN
VQRLAEPSQMLKHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKK
EASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALV
KMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCL
QILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAG
GMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQTTLAEVDVMQEGMEGLLGTLVQLLGS
DDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHL
TSRHQDAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQG
AIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIR
GLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV
ATYAAAVLFRMSEDKPQDYKKRLSVELTSSLFRTEPMTWNETGDLGLDIGAQGDALGYRQ
EDPSYRSFHSGGYGQDSMGMDSMMDHDMGAHHPGPEYPVDGLPDLGHAQDLIDGLPPGDS
NQLAWFDTDL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccagtctgatctgatggagctggacatggccatggagcctgaccggaaggct
gcagtgagccactggcagcagcagtcgtacctggactctggtatccactcaggggctacc
accaccgccccctccctgagtgggaagggcaacccagaggaggaggatgtggataaccag
gtgctgtacgagtgggagcagggcttctctcagtccttcacacaagatcaagtgtcagac
attgacgggcagtatgccatgaccagagcccagagggtgcgtgcggccatgtttccagag
accctggacgagggcatgcagctcccctccacccagtttgatggggcccaccccaccaac
gtgcagcggctggctgagccctctcagatgctgaagcatgccgtggtgaacctcatcaac
tatcaggatgacgccgagctggccacgcgtgccatccctgagctgaccaaactactcaac
gacgaggaccaggtggtggtgaacaaggctgcagtgatggtgcaccagttgtccaagaag
gaggctagccgccacgccatcatgcgctccccccagatggtgtcggcaattgtgcgcacc
atgcagaacaccaacgatgtggagacggcacgctgcactgccggcaccctgcacaacctg
tcccaccacagagagggtctgctggccatcttcaagtccgggggcatccccgcccttgtc
aaaatgcttgggtccccagtggactcagtgctgttctacgccatcaccaccctacacaac
ctgctgctccaccaggagggtgccaagatggctgtgcgtctggccgggggcctgcagaaa
atggtggccttgctcaacaagaccaacgtcaaattcctcgccatcacaacagattgcctt
cagattcttgcctacggcaaccaagaaagcaagcttatcattctggccagcggtgggccc
caggccctggtcaacatcatgaggacatacacatatgaaaagctgttgtggactaccagt
agagttctcaaagtgctctctgtctgctccagcaataagcctgccatcgtagaggctggt
ggtatgcaggctcttgggcttcacctcacagaccccagtcagagactagtccagaactgc
ctgtggaccctcaggaacctgtcagacgctgccaccaaacagacgaccttagctgaagta
gatgtgatgcaggagggtatggaaggtctgctggggaccctggtccagctcctgggctct
gatgacatcaacgtggtgacgtgtgctgccggcatactgtccaacctcacctgcaacaac
tacaagaacaagatgatggtgtgtcaggttggggggattgaggcgctggtccgtaccgtg
ctgcgtgccggagaccgcgaggacatcactgagccggccatctgcgccctgcgccacctc
accagccgccaccaggatgctgagatggcccagaatgctgtgcggcttcactacggcctg
cctgtggtggtcaagctgctgcatcccccctcccactggcccctcatcaaggccactgtg
ggcctaatccgtaacctggctctgtgtccagccaaccatgcccctctgcgtgagcagggg
gccatccccagactggtgcaactgctggtcagagcccaccaggacacccagagacgcacc
tccatgggaggcacccagcagcagtttgtggagggagttcgtatggaggagatcgtggag
ggctgtactggcgctctgcacatcctggctagagacgtccacaacagaatcgtcataaga
ggactcaacaccattccactctttgtccagctgttgtattctccaattgagaacattcag
cgtgtggctgcaggagttctgtgtgagttggcccaggacaaggaggcagcggaggccatc
gaggctgagggcgccaccgcccccctcacagagctgcttcactccagaaacgagggcgtg
gccacctatgctgctgctgttctgttccgtatgtctgaagacaagccccaggactataag
aagcgtctgtctgtggagctcaccagctccctgttcaggacggagcctatgacctggaac
gagacaggagatctgggcctggacatcggcgctcagggagatgccctgggctaccgtcag
gaagaccctagctatcgctccttccactctgggggatatgggcaggactccatgggtatg
gactccatgatggaccatgacatgggtgcccaccaccccggccctgaatacccagtcgac
gggctgcccgacctgggccacgcccaagacctgatcgatgggcttcccccaggcgacagc
aatcagttggcttggtttgatactgacctgtaa
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