Oncorhynchus tshawytscha (Chinook salmon): 112239238
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Entry
112239238 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: GATOR complex protein WDR59-like
KO
K20409
SEA/GATOR complex protein SEA3/WDR59
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
112239238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112239238
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
112239238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
zf-RING_16
zinc_ribbon_16
RWD
MIOS_WD40
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
112239238
NCBI-ProteinID:
XP_042172196
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MAARWSSENVVVELRDAQATAMSVDCLGRHAVLSGRRFLYVVNLELSWNPLTRQSPTVFA
ASSNQRVDLYTWRDGCGEVHASLQGHTRVISDLDWSWFEPEYLVTSSVDTYICIWDTRDT
RKPTVALSAVAGASQVKWNKRNQYLLASSHDGDVRIWDKRKPNTAVEYVAAHLSKIHGLD
WHPDNEYILATSSQDNSVRFWDYRQPRKYLNILSCQVPVWKARYTPFSNGLVTVMVPQLR
RENSLLLWSALDLNSPVHAFVGHDDVVLEFQWRPQKEASKEYQMVTLSRDQTLRIWRLDP
QLQKLCANDLVEDPIEGISLTTESEKSLPSQDPEPTIHSCGLPAEHLQDQAGALTSGGRH
DSSALPQTLQQEFSLVNLQIRNVNVEMDAVNRSCVVSAVFGTNQVHLVVKFPSHYPNNAA
PSFQFISPTTIPTAMRTKIQKILTDTSLQKVKRNQNCLEPCVRQLVSCLESYMTQEDGSA
ANPWVLSNPVTPALPAFXRVTNTYGSYQDANIPFPRTSGARFCGTGCLVYFTRPITMHRS
VPPTEPTPRSLSALSAYHSGVLAPMKMRSESQSSLRLYSGSPTHTDKDHVSISSFYYKER
KPPQSGLRRWSIHDCPKSRRFKTKREGADYGNRPVKLAGKVIIQEISCLLPVHKALGETY
ILNVNDIQDTCQKNAAAALVVGRRDVAKVWALASAATSLELSPDSDPDADAPWARHPFGR
HLLETLLDHYSLMSDVQTLAMLCSVFRTQGCSQDYFSLYGQQRSSLFPPHHSRYPSYTSS
SVSSGSCYSTSDSTTTTTWSIGRDPEQVPPLGESSPDDYRYANQMYTDPREREREQHDMN
KRLLDPANTMQFDDFKKCYGEILHRWGLKDKRAEVLKFTSCPPEPHKGIEFGVYCCHCRS
QVRGTQCAVCKRFTFQCAICHVAVRGSSNFCLSCGHGGHTSHMMEWFRTQDECPTGCGCH
CLLQSTF
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgctggagtagtgagaatgtggtggtggaattgcgagatgcgcaggccact
gctatgtccgtggactgcctgggtcgacatgctgtcctgtcaggacggaggtttctgtat
gtggtgaacctggagctctcctggaaccccctcacaaggcagagtcccaccgtcttcgct
gcctctagtaaccagcgagttgacctgtacacatggcgtgatggctgtggggaggtccac
gcgtccctgcagggacacacacgagtcatcagtgacttggactggtcctggtttgaaccg
gagtatctggtcaccagctctgtagacacctacatctgtatctgggataccagagacacg
aggaaacctactgtggcgttgtctgcagtggcgggagcgtcccaggtcaagtggaacaag
cgtaatcagtaccttctagcctccagtcatgatggagatgttcgcatctgggacaagagg
aaacccaacacagctgtggagtacgttgcagctcacctgtctaagatccacggtctggac
tggcaccctgacaacgaatacatcctggccacgtccagtcaggacaactccgtcaggttc
tgggactacagacagcccaggaagtacctgaacatcctgtcctgtcaggttcctgtgtgg
aaggccagatatactcctttctccaatggcctggtgacagtgatggttccccagctgaga
cgtgagaacagcttgttgctatggagcgctctggacctcaacagccccgtccacgccttc
gtgggacacgatgacgtggtgctagagttccagtggcgtccgcagaaagaagcttctaag
gagtaccagatggtgactttgtccagagaccagactctgagaatatggaggctggatcca
cagctacagaagctgtgtgccaacgacctggtagaggatccgatagaggggatcagccta
actaccgagtcagagaagagccttccctctcaggaccctgaacccaccatacacagctgt
ggcctgccagccgaacacctgcaggaccaggctggtgctctgacctccggtggtagacat
gactcttctgctctgccccagacactgcaacaggagttctctctggtcaacctgcagatc
aggaacgtcaacgtggagatggatgcggtgaatcgtagctgtgtggtgtcagccgtgttc
gggaccaaccaggtccacctggtggtgaagttcccgtcccactaccccaacaacgctgct
ccatccttccagttcatctcccctaccaccatccccacagccatgaggaccaagatacag
aagatcctgacagacacgtcactgcagaaggtcaagaggaatcagaactgtctggagccc
tgtgttagacagctggtgtcctgtctggagtcttacatgacccaggaggatggtagtgct
gccaacccgtgggtcctgtctaaccccgtgacccctgctctgccagccttcncccgggtc
accaacacctacggctcctaccaggatgccaacatccccttccctcgtacctccggggct
cgcttctgtggcaccggctgcttggtgtacttcacaagacccatcactatgcatcgctcg
gtaccacccactgaacccacacccaggtccctgtcggccctgtctgcgtaccacagtggg
gtccttgctcctatgaagatgcgtagtgagtctcagagctctctgaggctgtacagtggc
agccccacccacacggacaaggaccatgtctccatatcatcattctactacaaagaacgg
aagcctcctcagtctggccttcgccgctggtccattcatgactgcccgaagtctcgtcgg
ttcaagacgaagcgcgagggagccgactacggtaacagacccgtaaagctggcagggaaa
gtcatcatccaggagatctcctgtctgctgcccgttcacaaagccctgggggagacatac
attctgaatgtgaacgacatacaggacacgtgtcagaagaatgcagcagcagctctggtg
gtgggacgcagagacgtggctaaggtgtgggccctggcctcggctgccaccagcctagaa
ctcagtcctgactctgaccctgatgcagacgctccctgggccagacacccgtttggacgc
cacctgctggagactcttctggaccactacagtctgatgagtgatgtccagactctagcc
atgctgtgtagtgtgttcaggacccagggctgttcccaggactacttctctctgtatgga
cagcaacgctcttctctgtttccccctcatcactcccgataccccagctacacatccagc
tctgtgtcgtcaggctcctgttacagcacctcagactccaccaccaccactacctggagc
atcggtcgagacccggagcaggtccctcccttgggggagtcctcacctgacgactatcgc
tacgccaaccagatgtacacagacccccgcgagcgagagagagaacaacacgacatgaat
aaaaggctgctggacccagccaacaccatgcagtttgatgactttaagaagtgttacggg
gagatcctccatcgatggggtctgaaggacaagagagccgaggtcctcaagtttacatcc
tgtcctcctgaaccgcacaaaggcatcgagtttggtgtgtactgctgccattgtcgtagc
caggtgcgggggactcagtgtgctgtgtgtaagcgcttcaccttccagtgtgccatctgt
cacgtggctgtccgaggctcctctaacttctgtctgagttgtggtcacggggggcacacc
tcccacatgatggagtggttcagaacacaggacgaatgtcccacaggctgcggctgtcac
tgtctgctacagagcaccttctga
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