KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112239245
Entry
112239245         CDS       T05605                                 
Name
(RefSeq) cullin-3-like
  KO
K03869  cullin 3
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04120  Ubiquitin mediated proteolysis
otw04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112239245
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    112239245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:otw04121]
    112239245
   03400 DNA repair and recombination proteins [BR:otw03400]
    112239245
Ubiquitin system [BR:otw04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     112239245
DNA repair and recombination proteins [BR:otw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     112239245
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DUF6655 Stu2_CTS
Other DBs
NCBI-GeneID: 112239245
NCBI-ProteinID: XP_042184954
LinkDB
Position
LG10:73694640..73727442
AA seq 766 aa
MSNLKGGVKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNAY
TMVLHKHGEKLYTGLREVVTEHLVNKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDI
LMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGA
IRNACQMLMILGLEGRSVYEEDFESPFLEMSAEFFQMESQKFLAENSASVYIKKVEARIN
EEIERVLHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLGCMYKL
FSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKTRFDRFLLESFNN
DRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFM
QEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNT
TMDEFRQHLQSTGLSLGGVDLTVRVLTTGYWPTQSATPKCTIPPSPRHAFEVFRRFYLAK
HSGRQLTLQHHMGSADLNATFHGPIKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTIL
ILFNNREKSTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHVFTVN
DQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKRMQHNVL
VAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgtccaacctcaaaggcggcgtcaagaaggacaccaagatgaggataagagcctttcct
atgacaatggatgagaagtatgtcaacaatatctgggaccttctgaagaacgctatccag
gagatccagaggaagaacaacagcgggctgagctttgaggagctctacaggaacgcctac
acaatggtgctgcacaaacacggcgagaagctctacacgggcctgcgcgaggtcgtcacc
gagcacctcgtcaacaaagtacgggaagatgtcctaaactcgttaaacaataactttctg
cagactttgaatcaagcgtggaacgaccaccagacagccatggtcatgatcagagacatc
ctgatgtacatggaccgggtgtacgtgcagcaaaacaacgtggagaacgtctacaacctg
ggcctgatcatcttcagagaccaggtggtgcgctacggctgcatccgagaccacctgcga
cagaccctgctggacatgatcgcacgggagaggaaaggagaggtggtggacaggggagcg
atcaggaacgcctgtcagatgctgatgattctgggtctggagggtaggtctgtgtacgag
gaagactttgagtcccccttcttagaaatgtctgcagaattcttccagatggagagccag
aagttcctagcggagaacagtgccagtgtgtacatcaagaaggtggaggccaggatcaac
gaggagatagagcgggtgctgcactgcctggacaagtccacagaggagcccatcgtcaag
gtggtggaacgggagctcatctccaaacacatgaagaccatcgtggagatggagaattct
ggcctggttcacatgctcaagaacggcaagacagaagacctgggctgcatgtacaagctg
ttcagccgtgtgcctaacggcctgaagaccatgtgtgagtgtatgagctcctacctgagg
gagcagggcaaggctctggtgtcagaggagggagagggcaagaaccctgtcgactacatc
cagggcctgttggacctgaagacgcggttcgaccgtttcctcctggagtcgttcaacaac
gaccggctcttcaagcagaccatcgccggagactttgagtacttcctcaacctcaactcc
cgctccccagagtacctctccctcttcatcgacgacaagctcaagaagggagtcaaaggg
ctgacagaacaggaggtggagtccatcctggacaaggccatggttcttttccggttcatg
caggagaaggatgtgtttgagaggtactacaaacagcacttggcccggaggctgctcacc
aacaagagtgtctccgacgactctgaaaagaacatgatctctaagctaaagactgagtgt
ggctgtcagttcacctctaaactggaagggatgttcagagacatgagcatctccaacacc
accatggacgagttcagacaacacctacagtccacggggctgtctctagggggcgtcgac
ctcacagtaagagtactcaccactggctattggcccacacagtcggccacgcccaaatgc
accatccccccctccccgagacacgccttcgaggtcttcagaaggttctacttggccaaa
cacagtggcagacagttgaccctccagcaccacatgggctcagccgacctcaacgcaacc
ttccacggccccatcaagaaggaggatggttcggaggtgggagtgggaggagcccaggtg
acgggctctaacaccaggaagcacatactgcaggtctccaccttccagatgaccatcctc
atactcttcaacaacagagaaaagtccacgtttgaggagatccagcaggagacagacatc
ccggagagggagctggtgcgagcgctgcagtcgctggcctgcgggaagcccacccagcgc
gttctcaccaaggagcccaagtccaaggagatcgagaacggccacgtgtttacagtcaac
gatcagtttacctccaagctgcacagagtcaaaatacagacggtcgctgctaagcagggc
gagtcggacccagagaggaaggagacgcggcagaaggtggatgacgacaggaagcatgag
atcgaggcggccatcgtccgcatcatgaaatccagaaagaggatgcagcacaacgtcctg
gtagcagaggtcacccagcagctgagggcccggttcctccccagccccgtggtcattaag
aagcgcattgaaggactcatagagagagaatatttggcacggacgcctgaggatcgcaaa
gtctacacctacgttgcataa

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